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Reading computer program code and documentation written by others is, we are told, one of the best ways to learn the art of writing intelligible and maintainable code and documentation. The software resurrection exercise, introduced in this…

Software Engineering · Computer Science 2022-09-13 Abhishek Dutta

A common concern in experimental research is the auditability and reproducibility of experiments. Experiments are usually designed, provisioned, managed, and analyzed by diverse teams of specialists (e.g., researchers, technicians and…

Small to medium-scale data science experiments often rely on research software developed ad-hoc by individual scientists or small teams. Often there is no time to make the research software fast, reusable, and open access. The consequence…

Software Engineering · Computer Science 2022-11-10 Moritz Schubotz , Ankit Satpute , Andre Greiner-Petter , Akiko Aizawa , Bela Gipp

Scientific software-defined as computer programs, scripts, or code used in scientific research, data analysis, modeling, or simulation-has become central to modern research. However, there is limited research on the readability and…

Software Engineering · Computer Science 2025-01-20 Alyssia Chen , Carol Wong , Bonita Sharif , Anthony Peruma

While software and algorithms have become increasingly important in astronomy, the majority of authors who publish computational astronomy research do not share the source code they develop, making it difficult to replicate and reuse the…

Instrumentation and Methods for Astrophysics · Physics 2013-04-26 Lior Shamir , John F. Wallin , Alice Allen , Bruce Berriman , Peter Teuben , Robert J. Nemiroff , Jessica Mink , Robert J. Hanisch , Kimberly DuPrie

With the need to produce ever larger and more complex software systems, the use of reusable components has become increasingly imperative. Of the many existing and proposed techniques for software development, it seems clear that…

Software Engineering · Computer Science 2015-08-26 Luiz Fernando Capretz

To reproduce eScience, several challenges need to be solved: scientific workflows need to be automated; the involved software versions need to be provided in an unambiguous way; input data needs to be easily accessible; High-Performance…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-01-30 Kessy Abarenkov , Anne Fouilloux , Helmut Neukirchen , Abdulrahman Azab

Various fields of science face a reproducibility crisis. For quantum software engineering as an emerging field, it is therefore imminent to focus on proper reproducibility engineering from the start. Yet the provision of reproduction…

Software Engineering · Computer Science 2022-01-31 Wolfgang Mauerer , Stefanie Scherzinger

In computational science and in computer science, research software is a central asset for research. Computational science is the application of computer science and software engineering principles to solving scientific problems, whereas…

Software Engineering · Computer Science 2019-08-19 Wilhelm Hasselbring , Leslie Carr , Simon Hettrick , Heather Packer , Thanassis Tiropanis

So far, the relationship between open science and software engineering expertise has largely focused on the open release of software engineering research insights and reproducible artifacts, in the form of open-access papers, open data, and…

Software Engineering · Computer Science 2024-09-17 Cynthia C. S. Liem , Andrew M. Demetriou

Over the past few years, deep learning methods have been applied for a wide range of Software Engineering (SE) tasks, including in particular for the important task of automatically predicting and localizing faults in software. With the…

Software Engineering · Computer Science 2024-02-09 Adil Mukhtar , Dietmar Jannach , Franz Wotawa

Research software is essential to modern research, but it requires ongoing human effort to sustain: to continually adapt to changes in dependencies, to fix bugs, and to add new features. Software sustainability institutes, amongst others,…

Software Engineering · Computer Science 2021-05-21 Daniel S. Katz , Jeffrey C. Carver , Neil P. Chue Hong , Sandra Gesing , Simon Hettrick , Tom Honeyman , Karthik Ram , Nicholas Weber

Like other engineering disciplines, software engineering should also have principles to guide the construction of sustainable computer applications. Tangible properties include a) unlimited scalability, b) maximal reproducibility, and c)…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-07-23 Justin Shi

Scientific software is one of the key elements for reproducible research. However, classic publications and related scientific software are typically not (sufficiently) linked, and it lacks tools to jointly explore these artefacts. In this…

Digital Libraries · Computer Science 2018-06-21 Anett Hoppe , Jascha Hagen , Helge Holzmann , Günter Kniesel , Ralph Ewerth

Science reproducibility is a cornerstone feature in scientific workflows. In most cases, this has been implemented as a way to exactly reproduce the computational steps taken to reach the final results. While these steps are often…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-21 Karan Vahi , Mats Rynge , George Papadimitriou , Duncan A. Brown , Rajiv Mayani , Rafael Ferreira da Silva , Ewa Deelman , Anirban Mandal , Eric Lyons , Michael Zink

Research software is increasingly recognized as a vital component of the scholarly record. Journals offer authors the opportunity to publish research software papers, but often have different requirements for how these publications should…

Digital Libraries · Computer Science 2022-06-14 Nic Weber

Open data and open-source software may be part of the solution to science's "reproducibility crisis", but they are insufficient to guarantee reproducibility. Requiring minimal end-user expertise, encapsulator creates a "time capsule" with…

Requirements and code, in conventional software engineering wisdom, belong to entirely different worlds. Is it possible to unify these two worlds? A unified framework could help make software easier to change and reuse. To explore the…

Software Engineering · Computer Science 2016-02-18 Alexandr Naumchev , Bertrand Meyer , Victor Rivera

Scientific software projects evolve rapidly in their initial development phase, yet at the end of a funding period, the completion of a research project, thesis, or publication, further engagement in the project may slow down or cease…

General Literature · Computer Science 2021-05-10 Jörg Fehr , Christian Himpe , Stephan Rave , Jens Saak

With the advent of Open Science, researchers have started to publish their research artefacts (i. e., data, software, and other products of the investigations) in order to allow others to reproduce their investigations. While this…

Digital Libraries · Computer Science 2019-05-02 Max Schröder , Frank Krüger , Sascha Spors
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