English
Related papers

Related papers: A deep language model to predict metabolic network…

200 papers

Adaptive inference is a promising technique to improve the computational efficiency of deep models at test time. In contrast to static models which use the same computation graph for all instances, adaptive networks can dynamically adjust…

Computer Vision and Pattern Recognition · Computer Science 2019-08-20 Hao Li , Hong Zhang , Xiaojuan Qi , Ruigang Yang , Gao Huang

It is well known that deep generative models have a rich latent space, and that it is possible to smoothly manipulate their outputs by traversing this latent space. Recently, architectures have emerged that allow for more complex…

Machine Learning · Computer Science 2019-12-06 Andrew Gambardella , Atılım Güneş Baydin , Philip H. S. Torr

Transformer-based large language models have remarkable potential to accelerate design optimization for applications such as drug development and materials discovery. Self-supervised pretraining of transformer models requires large-scale…

Machine Learning · Computer Science 2023-10-27 Pei Zhang , Logan Kearney , Debsindhu Bhowmik , Zachary Fox , Amit K. Naskar , John Gounley

Predicting materials properties from composition or structure is of great interest to the materials science community. Deep learning has recently garnered considerable interest in materials predictive tasks with low model errors when…

Materials Science · Physics 2021-11-01 Chi Chen , Shyue Ping Ong

Deep Learning is a consolidated, state-of-the-art Machine Learning tool to fit a function when provided with large data sets of examples. However, in regression tasks, the straightforward application of Deep Learning models provides a point…

Machine Learning · Computer Science 2018-07-25 Axel Brando , Jose A. Rodríguez-Serrano , Mauricio Ciprian , Roberto Maestre , Jordi Vitrià

Recurrent neural networks can learn to predict upcoming words remarkably well on average; in syntactically complex contexts, however, they often assign unexpectedly high probabilities to ungrammatical words. We investigate to what extent…

Computation and Language · Computer Science 2019-09-04 Marten van Schijndel , Aaron Mueller , Tal Linzen

Predicting business process behaviour is an important aspect of business process management. Motivated by research in natural language processing, this paper describes an application of deep learning with recurrent neural networks to the…

Machine Learning · Computer Science 2017-05-05 Joerg Evermann , Jana-Rebecca Rehse , Peter Fettke

Machine learning algorithms have recently been considered for many tasks in the field of wireless communications. Previously, we have proposed the use of a deep fully convolutional neural network (CNN) for receiver processing and shown it…

Signal Processing · Electrical Eng. & Systems 2022-07-13 Janne M. J. Huttunen , Dani Korpi , Mikko Honkala

Deep neural networks are widely used prediction algorithms whose performance often improves as the number of weights increases, leading to over-parametrization. We consider a two-layered neural network whose first layer is frozen while the…

Machine Learning · Computer Science 2023-04-10 Roman Worschech , Bernd Rosenow

Pre-trained Transformers are challenging human performances in many NLP tasks. The massive datasets used for pre-training seem to be the key to their success on existing tasks. In this paper, we explore how a range of pre-trained Natural…

We consider the question of 30-minute prediction of blood glucose levels measured by continuous glucose monitoring devices, using clinical data. While most studies of this nature deal with one patient at a time, we take a certain percentage…

Machine Learning · Computer Science 2017-07-20 H. N. Mhaskar , S. V. Pereverzyev , M. D. van der Walt

Graph neural networks can accurately predict the chemical properties of many molecular systems, but their suitability for large, macromolecular assemblies such as gels is unknown. Here, graph neural networks were trained and optimised for…

Computational Physics · Physics 2025-04-14 D. A. Head

The objective of this paper is to design novel multi-layer neural network architectures for multiscale simulations of flows taking into account the observed data and physical modeling concepts. Our approaches use deep learning concepts…

Numerical Analysis · Mathematics 2018-06-14 Yating Wang , Siu Wun Cheung , Eric T. Chung , Yalchin Efendiev , Min Wang

State-of-the-art neural language models (LMs) represented by Transformers are highly complex. Their use of fixed, deterministic parameter estimates fail to account for model uncertainty and lead to over-fitting and poor generalization when…

Computation and Language · Computer Science 2021-02-10 Boyang Xue , Jianwei Yu , Junhao Xu , Shansong Liu , Shoukang Hu , Zi Ye , Mengzhe Geng , Xunying Liu , Helen Meng

The dominating NLP paradigm of training a strong neural predictor to perform one task on a specific dataset has led to state-of-the-art performance in a variety of applications (eg. sentiment classification, span-prediction based question…

Computation and Language · Computer Science 2021-09-06 Paul Michel

When optimizing transportation systems, anticipating traffic flows is a central element. Yet, computing such traffic equilibria remains computationally expensive. Against this background, we introduce a novel combinatorial optimization…

Machine Learning · Computer Science 2024-10-10 Kai Jungel , Dario Paccagnan , Axel Parmentier , Maximilian Schiffer

Recent artificial neural networks that process natural language achieve unprecedented performance in tasks requiring sentence-level understanding. As such, they could be interesting models of the integration of linguistic information in the…

Computation and Language · Computer Science 2023-02-17 Sophie Arana , Jacques Pesnot Lerousseau , Peter Hagoort

We establish connections between the Transformer architecture, originally introduced for natural language processing, and Graph Neural Networks (GNNs) for representation learning on graphs. We show how Transformers can be viewed as message…

Machine Learning · Computer Science 2025-06-30 Chaitanya K. Joshi

Large Language Models demonstrate remarkable mathematical capabilities but at the same time struggle with abstract reasoning and planning. In this study, we explore whether Transformers can learn to abstract and generalize the rules…

Neural and Evolutionary Computing · Computer Science 2024-12-03 Mikhail Burtsev

Networks effectively capture interactions among components of complex systems, and have thus become a mainstay in many scientific disciplines. Growing evidence, especially from biology, suggest that networks undergo changes over time, and…

Methodology · Statistics 2020-03-10 Ali Shojaie