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Related papers: Finite Element numerical schemes for a chemo-attra…

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We consider a class of finite element approximations for fourth-order parabolic equations that can be written as a system of second-order equations by introducing an auxiliary variable. In our approach, we first solve a variational problem…

Numerical Analysis · Mathematics 2021-06-30 Sana Keita , Abdelaziz Beljadid , Yves Bourgault

A finite element program is presented to simulate the process of packing and coiling elastic wires in two- and three-dimensional confining cavities. The wire is represented by third order beam elements and embedded into a corotational…

Soft Condensed Matter · Physics 2020-07-20 Roman Vetter , Falk K. Wittel , Norbert Stoop , Hans J. Herrmann

We investigate the numerical discretization of a two-stream kinetic system with an internal state, such system has been introduced to model the motion of cells by chemotaxis. This internal state models the intracellular methylation level.…

Analysis of PDEs · Mathematics 2020-06-11 Nicolas Vauchelet , Shugo Yasuda

In this chapter we focus first on the theoretical methods and relevant computational approaches to calculate the electronic structure of atoms, molecules, and clusters containing heavy elements for which relativistic effects become…

Chemical Physics · Physics 2021-10-05 Simone Taioli , Stefano Simonucci

We propose an efficient and accurate parametric finite element method (PFEM) for solving sharp-interface continuum models for solid-state dewetting of thin films with anisotropic surface energies. The governing equations of the…

Numerical Analysis · Mathematics 2017-01-10 Weizhu Bao , Wei Jiang , Yan Wang , Quan Zhao

Electrochemical interfaces are of fundamental importance in electrocatalysis, batteries, and metal corrosion. Finite-field methods are one of most reliable approaches for modeling electrochemical interfaces in complete cells under realistic…

Chemical Physics · Physics 2025-06-13 Chaoqiang Feng , Bin Jiang

In this paper, we study adaptive finite element approximations in a perturbation framework, which makes use of the existing adaptive finite element analysis of a linear symmetric elliptic problem. We prove the convergence and complexity of…

Numerical Analysis · Mathematics 2010-02-05 Lianhua He , Aihui Zhou

We study a chemotaxis-consumption mechanism, in which some chemical signal and cells density interact each other. In order to control the concentration of such a population, sources involving gradient nonlinearities, which introduce a…

Analysis of PDEs · Mathematics 2025-01-24 Daniel Acosta Soba , Alessandro Columbu , Giuseppe Viglialoro

Parameterized tight-binding models fit to first principles calculations can provide an efficient and accurate quantum mechanical method for predicting properties of molecules and solids. However, well-tested parameter sets are generally…

Materials Science · Physics 2023-04-28 Kevin F. Garrity , Kamal Choudhary

We propose a numerical procedure to study closure approximations for FENE dumbbells in terms of chosen macroscopic state variables, enabling to test straightforwardly which macroscopic state variables should be included to build good…

Mathematical Physics · Physics 2010-06-01 Giovanni Samaey , Tony Lelievre , Vincent Legat

Stochastic agent-based models can account for millions of cells with spatiotemporal movement that can be a function of different factors. However, these simulations can be computationally expensive. In this work, we develop a novel…

Numerical Analysis · Mathematics 2019-09-11 Michael A. Yereniuk , Sarah D. Olson

A time domain finite element numerical study of impedance spectroscopy in composite electroceramics is presented. The simulations take into account the complexity of the realistic three dimensional granular structure including grains and…

Materials Science · Physics 2012-09-19 Alexander Goncharov , Gino Hrkac , Julian Dean , Thomas Schrefl

We develop new more efficient A-WENO schemes for both hyperbolic systems of conservation laws and nonconservative hyperbolic systems. The new schemes are a very simple modification of the existing A-WENO schemes: They are obtained by a more…

Numerical Analysis · Mathematics 2025-05-26 Shaoshuai Chu , Alexander Kurganov , Ruixiao Xin

We consider a system of nonlinear partial differential equations describing the motion of an incompressible chemically reacting generalized Newtonian fluid in three space dimensions. The governing system consists of a steady…

Numerical Analysis · Mathematics 2017-08-29 Seungchan Ko , Endre Suli

This paper addresses the problem of evaluating the quality of finite element meshes for the purpose of structural mechanic simulations. It proposes the application of a machine learning model trained on data collected from expert…

Machine Learning · Computer Science 2021-07-23 Joachim Sprave , Christian Drescher

The finite element method has become a preeminent simulation technique in electromagnetics. For problems involving anisotropic media and metamaterials, proper algorithms should be developed. It has been proved that discretizing in quadratic…

Mathematical Physics · Physics 2009-10-21 E. Cojocaru

We propose a class of temporally high-order parametric finite element methods for simulating solid-state dewetting of thin films in two dimensions using a sharp-interface model. The process is governed by surface diffusion and contact point…

Numerical Analysis · Mathematics 2025-10-21 Xiaowen Gan , Yuqian Teng , Sisheng Wang

Compartmentalised biochemical reactions are a ubiquitous building block of biological systems. The interplay between chemical and compartmental dynamics can drive rich and complex dynamical behaviors that are difficult to analyse…

Molecular Networks · Quantitative Biology 2023-06-16 Tommaso Bianucci , Christoph Zechner

The numerical analysis of elastic wave propagation in unbounded media may be difficult to handle due to spurious waves reflected at the model artificial boundaries. Several sophisticated techniques such as nonreflecting boundary conditions,…

Classical Physics · Physics 2010-09-06 Jean-François Semblat , Ali Gandomzadeh , Luca Lenti

We propose a two-scale finite element method designed for heterogeneous microstructures. Our approach exploits domain diffeomorphisms between the microscopic structures to gain computational efficiency. By using a conveniently constructed…

Numerical Analysis · Mathematics 2024-10-24 Omar Richardson , Omar Lakkis , Adrian Muntean , Chandrasekhar Venkataraman