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Current efforts in the biomedical sciences and related interdisciplinary fields are focused on gaining a molecular understanding of health and disease, which is a problem of daunting complexity that spans many orders of magnitude in…

Quantitative Methods · Quantitative Biology 2014-01-24 Julián Candia , Jayanth R. Banavar , Wolfgang Losert

We studied a generalized question: chronic diseases like ME/CFS and long COVID exhibit high heterogeneity with multifactorial etiology and progression, complicating diagnosis and treatment. To address this, we developed BioMapAI, an…

Genomics · Quantitative Biology 2025-06-23 Ruoyun Xiong

Converting different modalities into generalized text, which then serves as input prompts for large language models (LLMs), is a common approach for aligning multimodal models, particularly when pairwise data is limited. Text-centric…

Machine Learning · Computer Science 2024-08-20 Yun-Da Tsai , Ting-Yu Yen , Keng-Te Liao , Shou-De Lin

Within the intensive care unit (ICU), a wealth of patient data, including clinical measurements and clinical notes, is readily available. This data is a valuable resource for comprehending patient health and informing medical decisions, but…

Machine Learning · Computer Science 2023-12-13 Ryan King , Tianbao Yang , Bobak Mortazavi

Cross-modal retrieval is the task of retrieving samples of a given modality by using queries of a different one. Due to the wide range of practical applications, the problem has been mainly focused on the vision and language case, e.g. text…

Computer Vision and Pattern Recognition · Computer Science 2024-01-30 Jorge Sánchez , Rodrigo Laguna

A core task in multi-modal learning is to integrate information from multiple feature spaces (e.g., text and audio), offering modality-invariant essential representations of data. Recent research showed that, classical tools such as {\it…

Machine Learning · Computer Science 2024-10-02 Subash Timilsina , Sagar Shrestha , Xiao Fu

Despite the recent success of Multimodal Foundation Models (FMs), their reliance on massive paired datasets limits their applicability in low-data and rare-scenario settings where aligned data is scarce and expensive. A key bottleneck is…

Machine Learning · Computer Science 2026-05-14 Truong Pham , Anay Majee , Rishabh Iyer

Fusing data from multiple modalities provides more information to train machine learning systems. However, it is prohibitively expensive and time-consuming to label each modality with a large amount of data, which leads to a crucial problem…

Computer Vision and Pattern Recognition · Computer Science 2020-07-15 Xinwei Sun , Yilun Xu , Peng Cao , Yuqing Kong , Lingjing Hu , Shanghang Zhang , Yizhou Wang

Advances in computer vision and deep learning have blurred the line between deepfakes and authentic media, undermining multimedia credibility through audio-visual forgery. Current multimodal detection methods remain limited by unbalanced…

Computer Vision and Pattern Recognition · Computer Science 2025-05-20 Zihan Xiong , Xiaohua Wu , Lei Chen , Fangqi Lou

Dynamical systems in the life sciences are often composed of complex mixtures of overlapping behavioral regimes. Cellular subpopulations may shift from cycling to equilibrium dynamics or branch towards different developmental fates. The…

Machine Learning · Computer Science 2025-10-13 Nathan Quiblier , Roy Friedman , Matthew Ricci

Cross-modal text-molecule retrieval model aims to learn a shared feature space of the text and molecule modalities for accurate similarity calculation, which facilitates the rapid screening of molecules with specific properties and…

Information Retrieval · Computer Science 2024-11-01 Jia Song , Wanru Zhuang , Yujie Lin , Liang Zhang , Chunyan Li , Jinsong Su , Song He , Xiaochen Bo

Brain-computer interfaces (BCIs), is ways for electronic devices to communicate directly with the brain. For most medical-type brain-computer interface tasks, the activity of multiple units of neurons or local field potentials is sufficient…

Machine Learning · Computer Science 2022-05-25 Lang Qian , Shengjie Zheng , Chunshan Deng , Cheng Yang , Xiaojian Li

Autonomous driving necessitates advanced object detection techniques that integrate information from multiple modalities to overcome the limitations associated with single-modal approaches. The challenges of aligning diverse data in early…

Computer Vision and Pattern Recognition · Computer Science 2024-10-14 Qihang Yang , Yang Zhao , Hong Cheng

Multimodal contrastive learning is a methodology for linking different data modalities; the canonical example is linking image and text data. The methodology is typically framed as the identification of a set of encoders, one for each…

Machine Learning · Statistics 2025-06-02 Ricardo Baptista , Andrew M. Stuart , Son Tran

The application of single-cell molecular profiling coupled with spatial technologies has enabled charting cellular heterogeneity in reference tissues and in disease. This new wave of molecular data has highlighted the expected diversity of…

Tissues and Organs · Quantitative Biology 2024-03-12 Ricardo Omar Ramirez Flores , Philipp Sven Lars Schäfer , Leonie Küchenhoff , Julio Saez-Rodriguez

Multimodal learning seeks to integrate information from heterogeneous sources, where signals may be shared across modalities, specific to individual modalities, or emerge only through their interaction. While self-supervised multimodal…

Machine Learning · Computer Science 2026-02-17 Carolin Cissee , Raneen Younis , Zahra Ahmadi

Magnetic Resonance Imaging (MRI) is instrumental in clinical diagnosis, offering diverse contrasts that provide comprehensive diagnostic information. However, acquiring multiple MRI contrasts is often constrained by high costs, long…

Computer Vision and Pattern Recognition · Computer Science 2024-09-04 Sanuwani Dayarathna , Kh Tohidul Islam , Bohan Zhuang , Guang Yang , Jianfei Cai , Meng Law , Zhaolin Chen

Multi-modal entity alignment (MMEA) aims to identify equivalent entities between two multi-modal knowledge graphs for integration. Unfortunately, prior arts have attempted to improve the interaction and fusion of multi-modal information,…

Machine Learning · Computer Science 2024-03-05 Luyao Wang , Pengnian Qi , Xigang Bao , Chunlai Zhou , Biao Qin

Multimodal pathological images are usually in clinical diagnosis, but computer vision-based multimodal image-assisted diagnosis faces challenges with modality fusion, especially in the absence of expert-annotated data. To achieve the…

Computer Vision and Pattern Recognition · Computer Science 2025-09-24 Qinghua Lin , Guang-Hai Liu , Zuoyong Li , Yang Li , Yuting Jiang , Xiang Wu

We introduce Contrastive Multivariate Singular Spectrum Analysis, a novel unsupervised method for dimensionality reduction and signal decomposition of time series data. By utilizing an appropriate background dataset, the method transforms a…

Machine Learning · Statistics 2018-11-01 Abdi-Hakin Dirie , Abubakar Abid , James Zou
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