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A singular attribute of humankind is our ability to undertake novel, cooperative behavior, or teamwork. This requires that we can communicate goals, plans, and ideas between the brains of individuals to create shared intentionality. Using…

Artificial Intelligence · Computer Science 2023-06-30 John Rushby

Food-webs and other classes of ecological network motifs, are a means of describing feeding relationships between consumers and producers in an ecosystem. They have application across scales where they differ only in the underlying…

Quantitative Methods · Quantitative Biology 2017-11-01 M. J. Wade , J. Oakley , S. Harbisher , N. G. Parker , J. Dolfing

With the rapid upliftment of technology, there has emerged a dire need to fine-tune or optimize certain processes, software, models or structures, with utmost accuracy and efficiency. Optimization algorithms are preferred over other methods…

Neural and Evolutionary Computing · Computer Science 2022-10-03 Thounaojam Chinglemba , Soujanyo Biswas , Debashish Malakar , Vivek Meena , Debojyoti Sarkar , Anupam Biswas

Complex system simulation has been playing an irreplaceable role in understanding, predicting, and controlling diverse complex systems. In the past few decades, the multi-scale simulation technique has drawn increasing attention for its…

Systems and Control · Electrical Eng. & Systems 2024-07-25 Huandong Wang , Huan Yan , Can Rong , Yuan Yuan , Fenyu Jiang , Zhenyu Han , Hongjie Sui , Depeng Jin , Yong Li

After a machine learning (ML)-based system is deployed, monitoring its performance is important to ensure the safety and effectiveness of the algorithm over time. When an ML algorithm interacts with its environment, the algorithm can affect…

Recent advances in agentic AI have led to systems capable of autonomous task execution and language-based reasoning, yet their spatial reasoning abilities remain limited and underexplored, largely constrained to symbolic and sequential…

Artificial Intelligence · Computer Science 2025-09-12 Bui Duc Manh , Soumyaratna Debnath , Zetong Zhang , Shriram Damodaran , Arvind Kumar , Yueyi Zhang , Lu Mi , Erik Cambria , Lin Wang

Computational modelling offers a powerful tool for formalising psychological theories, making them more transparent, testable, and applicable in digital contexts. Yet, the question often remains: how should one computationally model a…

Artificial Intelligence · Computer Science 2025-05-14 Erik M. Lintunen , Nadia M. Ady , Sebastian Deterding , Christian Guckelsberger

Artificial intelligence and machine learning are reshaping how we approach scientific discovery, not by replacing established methods but by extending what researchers can probe, predict, and design. In this roadmap we provide a…

It is essential to find new ways of enabling experts in different disciplines to collaborate more efficient in the development of ever more complex systems, under increasing market pressures. One possible solution for this challenge is to…

Systems and Control · Computer Science 2017-02-03 Cláudio Gomes , Casper Thule , David Broman , Peter Gorm Larsen , Hans Vangheluwe

Advances in robotic automation, high-performance computing (HPC), and artificial intelligence (AI) encourage us to conceive of science factories: large, general-purpose computation- and AI-enabled self-driving laboratories (SDLs) with the…

Reasoning has long been understood as a pathway between stages of understanding. Proper reasoning leads to understanding of a given subject. This reasoning was conceptualized as a process of understanding in a particular way, i.e.,…

Artificial Intelligence · Computer Science 2026-01-06 Hendrik Kempt , Alon Lavie

Over the past decade, neural networks have been successful at making predictions from biological sequences, especially in the context of regulatory genomics. As in other fields of deep learning, tools have been devised to extract features…

Genomics · Quantitative Biology 2022-12-27 Antoine Villié , Philippe Veber , Yohann de Castro , Laurent Jacob

We advocate here the use of computational logic for systems biology, as a \emph{unified and safe} framework well suited for both modeling the dynamic behaviour of biological systems, expressing properties of them, and verifying these…

Quantitative Methods · Quantitative Biology 2020-10-07 Elisabetta de Maria , Joelle Despeyroux , Amy Felty , Pietro Liò , Carlos Olarte , Abdorrahim Bahrami

Molecular simulations and biophysical experiments can be used to provide independent and complementary insights into the molecular origin of biological processes. A particularly useful strategy is to use molecular simulations as a modelling…

Chemical Physics · Physics 2019-12-10 Simone Orioli , Andreas Haahr Larsen , Sandro Bottaro , Kresten Lindorff-Larsen

In our understanding, a mind-map is an adaptive engine that basically works incrementally on the fundament of existing transactional streams. Generally, mind-maps consist of symbolic cells that are connected with each other and that become…

Neural and Evolutionary Computing · Computer Science 2009-02-19 Claudine Brucks , Michael Hilker , Christoph Schommer , Cynthia Wagner , Ralph Weires

Although many AI applications of interest require specialized multi-modal models, relevant data to train such models is inherently scarce or inaccessible. Filling these gaps with human annotators is prohibitively expensive, error-prone, and…

Artificial Intelligence · Computer Science 2026-04-01 Tim R. Davidson , Benoit Seguin , Enrico Bacis , Cesar Ilharco , Hamza Harkous

While large language models (LLMs) have transformed AI agents into proficient executors of computational materials science, performing a hundred simulations does not make a researcher. What distinguishes research from routine execution is…

Computational Physics · Physics 2026-03-16 Haonan Huang

The rapid advancement of autonomous systems, including self-driving vehicles and drones, has intensified the need to forge true Spatial Intelligence from multi-modal onboard sensor data. While foundation models excel in single-modal…

Computer Vision and Pattern Recognition · Computer Science 2026-01-09 Song Wang , Lingdong Kong , Xiaolu Liu , Hao Shi , Wentong Li , Jianke Zhu , Steven C. H. Hoi

To build a safe system that would replicate and perhaps transcend human-level intelligence, three basic modules: objective, agent, and perception are proposed for development. The objective module would ensure that the system acts in…

Computers and Society · Computer Science 2018-09-11 Ion Dronic

Computer-based modelling and simulation have become useful tools to facilitate humans to understand systems in different domains, such as physics, astrophysics, chemistry, biology, economics, engineering and social science. A complex system…

Artificial Intelligence · Computer Science 2021-02-03 Xing Su , Yan Kong , Weihua Li