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Automatically extracting the relationships between chemicals and diseases is significantly important to various areas of biomedical research and health care. Biomedical experts have built many large-scale knowledge bases (KBs) to advance…

Computation and Language · Computer Science 2019-12-24 Huiwei Zhou , Yunlong Yang , Shixian Ning , Zhuang Liu , Chengkun Lang , Yingyu Lin , Degen Huang

Causal knowledge extraction is the task of extracting relevant causes and effects from text by detecting the causal relation. Although this task is important for language understanding and knowledge discovery, recent works in this domain…

Computation and Language · Computer Science 2023-08-09 Anik Saha , Oktie Hassanzadeh , Alex Gittens , Jian Ni , Kavitha Srinivas , Bulent Yener

Syntactic parsing is the task of assigning a syntactic structure to a sentence. There are two popular syntactic parsing methods: constituency and dependency parsing. Recent works have used syntactic embeddings based on constituency trees,…

Computation and Language · Computer Science 2023-02-20 Subba Reddy Oota , Mounika Marreddy , Manish Gupta , Bapi Raju Surampud

With the advent of large language models (LLMs), the vast unstructured text within millions of academic papers is increasingly accessible for materials discovery, although significant challenges remain. While LLMs offer promising few- and…

Computation and Language · Computer Science 2025-09-30 Amit K Verma , Zhisong Zhang , Junwon Seo , Robin Kuo , Runbo Jiang , Emma Strubell , Anthony D Rollett

We introduce SetBERT, a fine-tuned BERT-based model designed to enhance query embeddings for set operations and Boolean logic queries, such as Intersection (AND), Difference (NOT), and Union (OR). SetBERT significantly improves retrieval…

Computation and Language · Computer Science 2024-06-27 Quan Mai , Susan Gauch , Douglas Adams

Estimation of semantic similarity is an important research problem both in natural language processing and the natural language understanding, and that has tremendous application on various downstream tasks such as question answering,…

Computation and Language · Computer Science 2025-06-24 R. Prashanth

Recently, conversational recommender system (CRS) has become an emerging and practical research topic. Most of the existing CRS methods focus on learning effective preference representations for users from conversation data alone. While, we…

Information Retrieval · Computer Science 2020-08-20 Kun Zhou , Wayne Xin Zhao , Hui Wang , Sirui Wang , Fuzheng Zhang , Zhongyuan Wang , Ji-Rong Wen

Constituent and dependency representation for syntactic structure share a lot of linguistic and computational characteristics, this paper thus makes the first attempt by introducing a new model that is capable of parsing constituent and…

Computation and Language · Computer Science 2019-09-27 Junru Zhou , Shuailiang Zhang , Hai Zhao

In recent years, summarizers that incorporate domain knowledge into the process of text summarization have outperformed generic methods, especially for summarization of biomedical texts. However, construction and maintenance of domain…

Computation and Language · Computer Science 2019-08-23 Milad Moradi , Matthias Samwald

Heavily pre-trained transformer models such as BERT have recently shown to be remarkably powerful at language modelling by achieving impressive results on numerous downstream tasks. It has also been shown that they are able to implicitly…

Information Retrieval · Computer Science 2021-03-05 Gustavo Penha , Claudia Hauff

The objective of this study is to develop natural language processing (NLP) models that can analyze patients' drug reviews and accurately classify their satisfaction levels as positive, neutral, or negative. Such models would reduce the…

Computation and Language · Computer Science 2023-08-09 Yue Ling

Probing complex language models has recently revealed several insights into linguistic and semantic patterns found in the learned representations. In this paper, we probe BERT specifically to understand and measure the relational knowledge…

Computation and Language · Computer Science 2021-09-09 Jonas Wallat , Jaspreet Singh , Avishek Anand

Pre-trained language models like BERT achieve superior performances in various NLP tasks without explicit consideration of syntactic information. Meanwhile, syntactic information has been proved to be crucial for the success of NLP…

Computation and Language · Computer Science 2021-03-09 Jiangang Bai , Yujing Wang , Yiren Chen , Yaming Yang , Jing Bai , Jing Yu , Yunhai Tong

This paper describes how we train BERT models to carry over a coding system developed on the paragraphs of a Hungarian literary journal to another. The aim of the coding system is to track trends in the perception of literary translation…

Computation and Language · Computer Science 2024-03-27 Dalma Galambos , Pál Zsámboki

BERT (Bidirectional Encoder Representations from Transformers) and related pre-trained Transformers have provided large gains across many language understanding tasks, achieving a new state-of-the-art (SOTA). BERT is pre-trained on two…

Computation and Language · Computer Science 2020-06-22 Michael Glass , Alfio Gliozzo , Rishav Chakravarti , Anthony Ferritto , Lin Pan , G P Shrivatsa Bhargav , Dinesh Garg , Avirup Sil

In practical scenario, relation extraction needs to first identify entity pairs that have relation and then assign a correct relation class. However, the number of non-relation entity pairs in context (negative instances) usually far…

Computation and Language · Computer Science 2019-06-24 Wei Ye , Bo Li , Rui Xie , Zhonghao Sheng , Long Chen , Shikun Zhang

This paper proposes a medical literature summary generation method based on the BERT model to address the challenges brought by the current explosion of medical information. By fine-tuning and optimizing the BERT model, we develop an…

Computation and Language · Computer Science 2024-10-29 Jiacheng Hu , Yiru Cang , Guiran Liu , Meiqi Wang , Weijie He , Runyuan Bao

We study the problem of leveraging the syntactic structure of text to enhance pre-trained models such as BERT and RoBERTa. Existing methods utilize syntax of text either in the pre-training stage or in the fine-tuning stage, so that they…

Computation and Language · Computer Science 2021-06-01 Zenan Xu , Daya Guo , Duyu Tang , Qinliang Su , Linjun Shou , Ming Gong , Wanjun Zhong , Xiaojun Quan , Nan Duan , Daxin Jiang

The contextual word embedding model, BERT, has proved its ability on downstream tasks with limited quantities of annotated data. BERT and its variants help to reduce the burden of complex annotation work in many interdisciplinary research…

Computation and Language · Computer Science 2022-04-07 Gechuan Zhang , Paul Nulty , David Lillis

We present a framework for generating universal semantic embeddings of chemical elements to advance materials inference and discovery. This framework leverages ElementBERT, a domain-specific BERT-based natural language processing model…

Computation and Language · Computer Science 2026-04-30 Yunze Jia , Yuehui Xian , Yangyang Xu , Pengfei Dang , Xiangdong Ding , Jun Sun , Yumei Zhou , Dezhen Xue
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