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We first introduce the notion of meta-rank for a 2-parameter persistence module, an invariant that captures the information behind images of morphisms between 1D slices of the module. We then define the meta-diagram of a 2-parameter…

Algebraic Topology · Mathematics 2023-03-16 Nate Clause , Tamal K. Dey , Facundo Mémoli , Bei Wang

Although there is no doubt that multi-parameter persistent homology is a useful tool to analyse multi-variate data, efficient ways to compute these modules are still lacking in the available topological data analysis toolboxes. Other issues…

Algebraic Topology · Mathematics 2021-04-15 Asilata Bapat , Robyn Brooks , Celia Hacker , Claudia Landi , Barbara I. Mahler

We apply modern methods in computational topology to the task of discovering and characterizing phase transitions. As illustrations, we apply our method to four two-dimensional lattice spin models: the Ising, square ice, XY, and…

Statistical Mechanics · Physics 2021-10-04 Alex Cole , Gregory J. Loges , Gary Shiu

This article introduces an algorithm to compute the persistent homology of a filtered complex with various coefficient fields in a single matrix reduction. The algorithm is output-sensitive in the total number of distinct persistent…

Computational Geometry · Computer Science 2020-01-10 Jean-Daniel Boissonnat , Clément Maria

We define bigraded persistent homology modules and bigraded barcodes of a finite pseudo-metric space X using the ordinary and double homology of the moment-angle complex associated with the Vietoris-Rips filtration of X. We prove a…

Algebraic Topology · Mathematics 2025-09-09 Anthony Bahri , Ivan Limonchenko , Taras Panov , Jongbaek Song , Donald Stanley

The process of dynamic state estimation (filtering) based on point process observations is in general intractable. Numerical sampling techniques are often practically useful, but lead to limited conceptual insight about optimal…

Machine Learning · Statistics 2016-09-13 Yuval Harel , Ron Meir , Manfred Opper

In many applications of evolutionary algorithms the computational cost of applying operators and storing populations is comparable to the cost of fitness evaluation. Furthermore, by knowing what exactly has changed in an individual by an…

Neural and Evolutionary Computing · Computer Science 2023-06-30 Maxim Buzdalov

Regenerating codes are efficient methods for distributed storage in storage networks, where node failures are common. They guarantee low cost data reconstruction and repair through accessing only a predefined number of arbitrarily chosen…

Information Theory · Computer Science 2017-11-09 Kaveh Mahdaviani , Ashish Khisti , Soheil Mohajer

The rapid growth of transformer-based models increases the concerns about their integrity and ownership insurance. Watermarking addresses this issue by embedding a unique identifier into the model, while preserving its performance. However,…

Cryptography and Security · Computer Science 2024-01-19 Pierre Fernandez , Guillaume Couairon , Teddy Furon , Matthijs Douze

Persistent homology is a popular and powerful tool for capturing topological features of data. Advances in algorithms for computing persistent homology have reduced the computation time drastically -- as long as the algorithm does not…

Computational Geometry · Computer Science 2013-10-03 Ulrich Bauer , Michael Kerber , Jan Reininghaus

Persistent cycles, especially the minimal ones, are useful geometric features functioning as augmentations for the intervals in a purely topological persistence diagram (also termed as barcode). In our earlier work, we showed that computing…

Computational Geometry · Computer Science 2020-02-18 Tamal K. Dey , Tao Hou , Sayan Mandal

In this paper, we propose Quasi Zigzag Persistent Homology (QZPH) as a framework for analyzing time-varying data by integrating multiparameter persistence and zigzag persistence. To this end, we introduce a stable topological invariant that…

Machine Learning · Computer Science 2026-01-21 Tamal K. Dey , Shreyas N. Samaga

The paper proposes an improved error-resilient Lempel-Ziv'77 (LZ'77) algorithm employing an adaptive amount of parity bits for error protection. It is a modified version of error resilient algorithm LZRS'77, proposed recently, which uses a…

Information Theory · Computer Science 2008-04-21 Tomaz Korosec , Saso Tomazic

A new machine learning scheme, termed versatile reservoir computing, is proposed for sustaining the dynamics of heterogeneous complex networks. We show that a single, small-scale reservoir computer trained on time series from a subset of…

Chaotic Dynamics · Physics 2025-05-22 Yao Du , Huawei Fan , Xingang Wang

To compute the persistent homology of a grayscale digital image one needs to build a simplicial or cubical complex from it. For cubical complexes, the two commonly used constructions (corresponding to direct and indirect digital…

Algebraic Topology · Mathematics 2024-08-26 Bea Bleile , Adélie Garin , Teresa Heiss , Kelly Maggs , Vanessa Robins

In this paper, we reinterprets the $(k+2,k)$ Zigzag code in coding matrix and then propose an optimal exact repair strategy for its parity nodes, whose repair disk I/O approaches a lower bound derived in this paper.

Information Theory · Computer Science 2015-03-23 Jie Li , Xiaohu Tang

0-dimensional persistent homology is known, from a computational point of view, as the easy case. Indeed, given a list of $n$ edges in non-decreasing order of filtration value, one only needs a union-find data structure to keep track of the…

Computational Geometry · Computer Science 2023-12-12 Marc Glisse

We give an algorithm that learns a representation of data through compression. The algorithm 1) predicts bits sequentially from those previously seen and 2) has a structure and a number of computations similar to an autoencoder. The…

Computer Vision and Pattern Recognition · Computer Science 2011-08-05 Karol Gregor , Yann LeCun

We study the algorithmic complexity of computing the persistence barcode of a randomly generated filtration. We provide a general technique to bound the expected complexity of reducing the boundary matrix in terms of the density of its…

Algebraic Topology · Mathematics 2025-09-05 Barbara Giunti , Guillaume Houry , Michael Kerber , Matthias Söls

We extend the persistence algorithm, viewed as an algorithm computing the homology of a complex of free persistence or graded modules, to complexes of modules that are not free. We replace persistence modules by their presentations and…

Algebraic Topology · Mathematics 2024-03-19 Tamal K. Dey , Florian Russold , Shreyas N. Samaga
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