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The computational prediction of a protein structure from its sequence generally relies on a method to assess the quality of protein models. Most assessment methods rank candidate models using heavily engineered structural features, defined…

Biomolecules · Quantitative Biology 2018-11-26 Georgy Derevyanko , Sergei Grudinin , Yoshua Bengio , Guillaume Lamoureux

Deep convolutional neural networks (CNNs) have emerged as a new paradigm for Mammogram diagnosis. Contemporary CNN-based computer-aided-diagnosis (CAD) for breast cancer directly extract latent features from input mammogram image and ignore…

Image and Video Processing · Electrical Eng. & Systems 2020-08-13 Heyi Li , Dongdong Chen , William H. Nailon , Mike E. Davies , David Laurenson

We investigate the possibility of applying machine learning techniques to images of strongly lensed galaxies to detect a low mass cut-off in the spectrum of dark matter sub-halos within the lens system. We generate lensed images of systems…

Cosmology and Nongalactic Astrophysics · Physics 2020-05-13 Sreedevi Varma , Malcolm Fairbairn , Julio Figueroa

The mass composition of high energy cosmic rays above $10^{17}$ eV is a crucial issue to solve some open questions in astrophysics such as the acceleration and propagation mechanisms. Unfortunately, the standard procedures to identify the…

Astrophysics · Physics 2008-11-26 F. Catalani , J. A. Chinellato , V. de Souza , J. Takahashi , G. M. S. Vasconcelos

In the field of transmission electron microscopy, data interpretation often lags behind acquisition methods, as image processing methods often have to be manually tailored to individual datasets. Machine learning offers a promising approach…

Image and Video Processing · Electrical Eng. & Systems 2021-07-07 C. K. Groschner , Christina Choi , M. C. Scott

In this work, we propose a method for efficient learning of a multi-dimensional function. This method combines the Bayesian neural networks and the query-by-committee method. A committee made of deep Bayesian neural networks not only can…

Computational Physics · Physics 2020-11-13 Li Chen , Xiao Liang , Hui Zhai

The chemical composition of the highest end of the ultra-high-energy cosmic ray spectrum is very hard to measure experimentally, and to this day it remains mostly unknown. Since the trajectories of ultra-high-energy cosmic rays are…

High Energy Astrophysical Phenomena · Physics 2022-12-14 Konstantinos Tanidis , Federico R. Urban , Stefano Camera

Recording atomic-resolution transmission electron microscopy (TEM) images is becoming increasingly routine. A new bottleneck is then analyzing this information, which often involves time-consuming manual structural identification. We have…

3D microscopy is key in the investigation of diverse biological systems, and the ever increasing availability of large datasets demands automatic cell identification methods that not only are accurate, but also can imply the uncertainty in…

Computer Vision and Pattern Recognition · Computer Science 2021-02-24 Alvaro Gomariz , Tiziano Portenier , César Nombela-Arrieta , Orcun Goksel

We report an interpretation method for deep learning models that allows us to handle high-dimensional spectral data in materials science. The proposed method uses feature extraction and clustering analysis to categorize materials into…

Materials Science · Physics 2025-10-21 Akira Takahashi , Yu Kumagai , Arata Takamatsu , Fumiyasu Oba

The Dark Matter present in the Large-Scale Structure of the Universe is invisible, but its presence can be inferred through the small gravitational lensing effect it has on the images of far away galaxies. By measuring this lensing effect…

Cosmology and Nongalactic Astrophysics · Physics 2020-11-18 Benjamin Remy , Francois Lanusse , Zaccharie Ramzi , Jia Liu , Niall Jeffrey , Jean-Luc Starck

We present a deep learning, computer vision algorithm constructed for the purposes of identifying and classifying charged particles in camera image sensors. We apply our algorithm to data collected by the Distributed Electronic Cosmic-ray…

Deep learning models frequently make incorrect predictions with high confidence when presented with test examples that are not well represented in their training dataset. We propose a novel and straightforward approach to estimate…

Machine Learning · Computer Science 2019-10-04 Tiago Ramalho , Miguel Miranda

Our work proposes a novel deep learning framework for estimating crowd density from static images of highly dense crowds. We use a combination of deep and shallow, fully convolutional networks to predict the density map for a given crowd…

Computer Vision and Pattern Recognition · Computer Science 2016-08-23 Lokesh Boominathan , Srinivas S S Kruthiventi , R. Venkatesh Babu

Particle identification in large high-energy physics experiments typically relies on classifiers obtained by combining many experimental observables. Predicting the probability density function (pdf) of such classifiers in the multivariate…

High Energy Physics - Experiment · Physics 2022-02-11 Giacomo Graziani , Lucio Anderlini , Saverio Mariani , Edoardo Franzoso , Luciano Libero Pappalardo , Pasquale di Nezza

Deep learning methods can be found in many medical imaging applications. Recently, those methods were applied directly to the RF ultrasound multi-channel data to enhance the quality of the reconstructed images. In this paper, we apply a…

Signal Processing · Electrical Eng. & Systems 2020-11-23 Nissim Peretz , Arie Feuer

In this work we test the ability of deep learning methods to provide an end-to-end mapping between low and high resolution images applying it to the iris recognition problem. Here, we propose the use of two deep learning single-image…

Image and Video Processing · Electrical Eng. & Systems 2023-11-03 Eduardo Ribeiro , Andreas Uhl , Fernando Alonso-Fernandez , Reuben A. Farrugia

Artificial neural networks have been successfully applied to a variety of machine learning tasks, including image recognition, semantic segmentation, and machine translation. However, few studies fully investigated ensembles of artificial…

Machine Learning · Statistics 2017-04-07 Cheng Ju , Aurélien Bibaut , Mark J. van der Laan

Accurately measuring the size, morphology, and structure of nanoparticles is very important, because they are strongly dependent on their properties for many applications. In this paper, we present a deep-learning based method for…

Materials Science · Physics 2022-07-29 Claudius Zelenka , Marius Kamp , Kolja Strohm , Akram Kadoura , Jacob Johny , Reinhard Koch , Lorenz Kienle

The atmospheric depth where the energy deposit profile of secondary particles from extensive air showers (EAS) reaches its maximum, $X_{\rm max}$, is related to the primary particle mass. The mass composition of the ultra-high energy cosmic…

High Energy Astrophysical Phenomena · Physics 2020-02-19 Nicusor Arsene , Octavian Sima
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