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Geometric embeddings have recently received attention for their natural ability to represent transitive asymmetric relations via containment. Box embeddings, where objects are represented by n-dimensional hyperrectangles, are a particularly…

Machine Learning · Computer Science 2020-10-30 Shib Sankar Dasgupta , Michael Boratko , Dongxu Zhang , Luke Vilnis , Xiang Lorraine Li , Andrew McCallum

This paper addresses the problem of mapping high-dimensional data to a low-dimensional space, in the presence of other known features. This problem is ubiquitous in science and engineering as there are often controllable/measurable features…

Machine Learning · Statistics 2024-01-01 Anh Tuan Bui

Software visualization tools can facilitate program comprehension by providing visual metaphors, or abstractions that reduce the amount of textual data that needs to be processed mentally. One way they do this is by enabling developers to…

Software Engineering · Computer Science 2025-10-02 Malte Hansen , Jens Bamberg , Noe Baumann , Wilhelm Hasselbring

Biological systems commonly exhibit complex spatiotemporal patterns whose underlying generative mechanisms pose a significant analytical challenge. Traditional approaches to spatiodynamic inference rely on dimensionality reduction through…

Quantitative Methods · Quantitative Biology 2025-08-01 Jun Won Park , Kangyu Zhao , Sanket Rane

This paper proposes an embedding method for co-occurrence data aimed at visual information exploration. We consider cases where co-occurrence probabilities are measured between pairs of elements from heterogeneous domains. The proposed…

Machine Learning · Computer Science 2025-08-26 Takuro Ishida , Tetsuo Furukawa

We propose a novel probabilistic dimensionality reduction framework that can naturally integrate the generative model and the locality information of data. Based on this framework, we present a new model, which is able to learn a smooth…

Machine Learning · Statistics 2016-10-18 Li Wang

Embedding is a useful technique to project a high-dimensional feature into a low-dimensional space, and it has many successful applications including link prediction, node classification and natural language processing. Current approaches…

Information Retrieval · Computer Science 2020-09-21 Meimei Liu , Hongxia Yang

Multidimensional scaling allows visualizing high-dimensional data as 2D maps with the premise that insights in 2D reveal valid information in high-dimensions. However, the resulting projections suffer from artifacts such as bad local…

Human-Computer Interaction · Computer Science 2017-05-16 Nicolas Heulot , Jean-Daniel Fekete , Michael Aupetit

We present a new technique called "DSNE" which learns the velocity embeddings of low dimensional map points when given the high-dimensional data points with its velocities. The technique is a variation of Stochastic Neighbor Embedding,…

Machine Learning · Computer Science 2021-03-16 Songting Shi

The growing complexity of spatial and structural information in 3D data makes data inspection and visualization a challenging task. We describe a method to create a planar embedding of 3D treelike structures using their skeleton…

Graphics · Computer Science 2022-02-23 Ping Hu , Saeed Boorboor , Joseph Marino , Arie E. Kaufman

Multidimensional scaling is a statistical process that aims to embed high dimensional data into a lower-dimensional space; this process is often used for the purpose of data visualisation. Common multidimensional scaling algorithms tend to…

Machine Learning · Computer Science 2022-02-25 Pierre Lambert , Cyril de Bodt , Michel Verleysen , John Lee

We present here a browser-based application for visualizing patterns of connectivity in 3D stacked data matrices with large numbers of pairwise relations. Visualizing a connectivity matrix, looking for trends and patterns, and dynamically…

Neurons and Cognition · Quantitative Biology 2018-01-04 David J. Caldwell , Jing Wu , Kaitlyn Casimo , Jeffrey G. Ojemann , Rajesh P. N. Rao

The recent proliferation of publicly available graph-structured data has sparked an interest in machine learning algorithms for graph data. Since most traditional machine learning algorithms assume data to be tabular, embedding algorithms…

Machine Learning · Computer Science 2019-08-09 Sourav Mukherjee , Tim Oates , Ryan Wright

Lens visualization has been a prominent research area in the visualization community, fueled by the continuous need to mitigate visual clutter and occlusion resulting from the increase in data volume. Interactive lenses for spatial data,…

Graphics · Computer Science 2025-06-09 Roberta Mota , Ehud Sharlin , Usman Alim

We present a new technique for visualizing high-dimensional data called cluster MDS (cl-MDS), which addresses a common difficulty of dimensionality reduction methods: preserving both local and global structures of the original sample in a…

Graphics · Computer Science 2024-05-27 Patricia Hernández-León , Miguel A. Caro

We propose a learning framework to find the representation of a robot's kinematic structure and motion embedding spaces using graph neural networks (GNN). Finding a compact and low-dimensional embedding space for complex phenomena is a key…

Robotics · Computer Science 2023-02-01 J. Taery Kim , Jeongeun Park , Sungjoon Choi , Sehoon Ha

In Geographical Information search, map visualization can challenge the user because results can consist of a large set of heterogeneous items, increasing visual complexity. We propose a novel visualization model to address this issue. Our…

Human-Computer Interaction · Computer Science 2020-04-02 Liliana Ardissono , Matteo Delsanto , Maurizio Lucenteforte , Noemi Mauro , Adriano Savoca , Daniele Scanu

Information visualization is essential in making sense out of large data sets. Often, high-dimensional data are visualized as a collection of points in 2-dimensional space through dimensionality reduction techniques. However, these…

Computational Geometry · Computer Science 2009-07-16 Emden R. Gansner , Yifan Hu , Stephen G. Kobourov

Dimensionality reduction techniques are widely used for visualizing high-dimensional data in two dimensions. Existing methods are typically designed to preserve either local (e.g., $t$-SNE, UMAP) or global (e.g., MDS, PCA) structure of the…

Machine Learning · Computer Science 2026-02-02 Noël Kury , Dmitry Kobak , Sebastian Damrich

Graph-based representations such as Scene Graphs enable localization in structured indoor environments by matching a locally observed graph, constructed from sensor data, to a prior map. This process is particularly challenging in…