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Maximal clique enumeration appears in various real-world networks, such as social networks and protein-protein interaction networks for different applications. For general graph inputs, the number of maximal cliques can be up to…

Discrete Mathematics · Computer Science 2023-03-14 Hodaka Yamaji

Summary: Most cellular tasks are performed not by individual proteins, but by groups of functionally associated proteins, often referred to as modules. In a protein assocation network modules appear as groups of densely interconnected…

Molecular Networks · Quantitative Biology 2007-05-23 Balazs Adamcsek , Gergely Palla , Illes J. Farkas , Imre Derenyi , Tamas Vicsek

For a $k$-graph $\mathcal{F}\subset \binom{[n]}{k}$, the clique number of $\mathcal{F}$ is defined to be the maximum size of a subset $Q$ of $[n]$ with $\binom{Q}{k}\subset \mathcal{F}$. In the present paper, we determine the maximum number…

Combinatorics · Mathematics 2021-01-01 Peter Frankl , Erica L. L. Liu , Jian Wang

Finding optimal matchings in dense graphs is of general interest and of particular importance in social, transportation and biological networks. While developing optimal solutions for various matching problems is important, the running…

Data Structures and Algorithms · Computer Science 2020-11-16 Nitish K. Panigrahy , Prithwish Basu , Don Towsley

Clustering graphs based on a comparison of the number of links within clusters and the expected value of this quantity in a random graph has gained a lot of attention and popularity in the last decade. Recently, Aldecoa and Marin proposed a…

Data Structures and Algorithms · Computer Science 2013-10-23 Tobias Fleck , Andrea Kappes , Dorothea Wagner

Recently, Ma, Qian and Shi determined the maximum size of an $n$-vertex graph with given fractional matching number $s$ and maximum degree at most $d$. Motivated by this result, we determine the maximum number of $\ell$-cliques in a graph…

Combinatorics · Mathematics 2024-04-18 Chengli Li , Yurui Tang

The (Perfect) Matching Cut problem is to decide if a graph $G$ has a (perfect) matching cut, i.e., a (perfect) matching that is also an edge cut of $G$. Both Matching Cut and Perfect Matching Cut are known to be NP-complete. A perfect…

Combinatorics · Mathematics 2024-06-13 Felicia Lucke , Daniël Paulusma , Bernard Ries

Reducing the running time of graph algorithms is vital for tackling real-world problems such as shortest paths and matching in large-scale graphs, where path information plays a crucial role. To address this critical challenge, this paper…

Data Structures and Algorithms · Computer Science 2026-04-14 Akshar Chavan , Sanaz Rabinia , Daniel Grosu , Marco Brocanelli

Clique-width is a well-studied graph parameter owing to its use in understanding algorithmic tractability: if the clique-width of a graph class ${\cal G}$ is bounded by a constant, a wide range of problems that are NP-complete in general…

Combinatorics · Mathematics 2021-12-23 Konrad K. Dabrowski , Matthew Johnson , Daniël Paulusma

Bipartite Correlation clustering is the problem of generating a set of disjoint bi-cliques on a set of nodes while minimizing the symmetric difference to a bipartite input graph. The number or size of the output clusters is not constrained…

Data Structures and Algorithms · Computer Science 2010-12-15 Nir Ailon , Noa Avigdor-Elgrabli , Edo Liberty

Complex networks contain complete subgraphs such as nodes, edges, triangles, etc., referred to as simplices and cliques of different orders. Notably, cavities consisting of higher-order cliques play an important role in brain functions.…

Neural and Evolutionary Computing · Computer Science 2021-11-02 Dinghua Shi , Zhifeng Chen , Xiang Sun , Qinghua Chen , Chuang Ma , Yang Lou , Guanrong Chen

A maximal matching $M$ that consists of independent edges is a subgraph of a simple and undirected graph $G$ for which $G-M$ forms an independent set. A graph $G$ is called equimatchable if all maximal matchings have the same number of…

Combinatorics · Mathematics 2019-11-12 Mehmet Akif Yıldız

In this paper, the problem of matching pairs of correlated random graphs with multi-valued edge attributes is considered. Graph matching problems of this nature arise in several settings of practical interest including social network…

Information Theory · Computer Science 2018-02-06 F. Shirani , S. Garg , E. Erkip

Finding patterns in large highly connected datasets is critical for value discovery in business development and scientific research. This work focuses on the problem of subgraph matching on streaming graphs, which provides utility in a…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-22 Bibek Bhattarai , Howie Huang

The Cluster Deletion problem takes a graph $G$ as input and asks for a minimum size set of edges $X$ such that $G-X$ is the disjoint union of complete graphs. An equivalent formulation is the Clique Partition problem, which asks to find a…

Data Structures and Algorithms · Computer Science 2025-09-26 Nicola Galesi , Tony Huynh , Fariba Ranjbar

A hypergraph is a useful combinatorial object to model ternary or higher-order relations among entities. Clustering hypergraphs is a fundamental task in network analysis. In this study, we develop two clustering algorithms based on…

Data Structures and Algorithms · Computer Science 2021-10-27 Yuuki Takai , Atsushi Miyauchi , Masahiro Ikeda , Yuichi Yoshida

The maximal clique enumeration (MCE) problem has numerous applications in biology, chemistry, sociology, and graph modeling. Though this problem is well studied, most current research focuses on finding solutions in large sparse graphs or…

Data Structures and Algorithms · Computer Science 2018-01-03 Pablo San Segundo , Jorge Artieda , Darren Strash

Community detection is a popular approach to understand the organization of interactions in static networks. For that purpose, the Clique Percolation Method (CPM), which involves the percolation of k-cliques, is a well-studied technique…

Social and Information Networks · Computer Science 2024-05-27 Alexis Baudin , Lionel Tabourier , Clémence Magnien

Clique counting is a fundamental task in network analysis, and even the simplest setting of $3$-cliques (triangles) has been the center of much recent research. Getting the count of $k$-cliques for larger $k$ is algorithmically challenging,…

Data Structures and Algorithms · Computer Science 2020-01-22 Shweta Jain , C. Seshadhri

Many graph mining applications rely on detecting subgraphs which are near-cliques. There exists a dichotomy between the results in the existing work related to this problem: on the one hand the densest subgraph problem (DSP) which maximizes…

Data Structures and Algorithms · Computer Science 2014-05-22 Charalampos E. Tsourakakis