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While uncertainty estimation for graphs recently gained traction, most methods rely on homophily and deteriorate in heterophilic settings. We address this by analyzing message passing neural networks from an information-theoretic…

Machine Learning · Computer Science 2026-05-12 Dominik Fuchsgruber , Tom Wollschläger , Johannes Bordne , Stephan Günnemann

Graphs are structured data that models complex relations between real-world entities. Heterophilic graphs, where linked nodes are prone to be with different labels or dissimilar features, have recently attracted significant attention and…

Social and Information Networks · Computer Science 2025-03-21 Chenghua Gong , Yao Cheng , Jianxiang Yu , Can Xu , Caihua Shan , Siqiang Luo , Xiang Li

Heterophily, or the tendency of connected nodes in networks to have different class labels or dissimilar features, has been identified as challenging for many Graph Neural Network (GNN) models. While the challenges of applying GNNs for node…

Machine Learning · Computer Science 2024-09-27 Jiong Zhu , Gaotang Li , Yao-An Yang , Jing Zhu , Xuehao Cui , Danai Koutra

Homophily principle, \ie{} nodes with the same labels or similar attributes are more likely to be connected, has been commonly believed to be the main reason for the superiority of Graph Neural Networks (GNNs) over traditional Neural…

Modularity is designed to measure the strength of division of a network into clusters (known also as communities). Networks with high modularity have dense connections between the vertices within clusters but sparse connections between…

Probability · Mathematics 2017-07-18 Liudmila Ostroumova Prokhorenkova , Pawel Pralat , Andrei Raigorodskii

Homophily principle, i.e., nodes with the same labels are more likely to be connected, has been believed to be the main reason for the performance superiority of Graph Neural Networks (GNNs) over Neural Networks on node classification…

Social and Information Networks · Computer Science 2024-01-03 Sitao Luan , Chenqing Hua , Minkai Xu , Qincheng Lu , Jiaqi Zhu , Xiao-Wen Chang , Jie Fu , Jure Leskovec , Doina Precup

Graph-based collaborative filtering (CF) algorithms have gained increasing attention. Existing work in this literature usually models the user-item interactions as a bipartite graph, where users and items are two isolated node sets and…

Information Retrieval · Computer Science 2020-11-19 Zekun Li , Yujia Zheng , Shu Wu , Xiaoyu Zhang , Liang Wang

A key measure that has been used extensively in analyzing complex networks is the degree of a node (the number of the node's neighbors). Because of its discrete nature, when the degree measure was used in analyzing weighted networks,…

Physics and Society · Physics 2009-04-15 Sherief Abdallah

Understanding the causes and effects of network structural features is a key task in deciphering complex systems. In this context, the property of network nestedness has aroused a fair amount of interest as regards ecological networks.…

Physics and Society · Physics 2013-09-23 Samuel Johnson , Virginia Dominguez-Garcia , Miguel A. Munoz

Graph heterophily, where connected nodes have different labels, has attracted significant interest recently. Most existing works adopt a simplified approach - using low-pass filters for homophilic graphs and high-pass filters for…

Machine Learning · Computer Science 2025-10-14 Shuaicheng Zhang , Haohui Wang , Junhong Lin , Xiaojie Guo , Yada Zhu , Si Zhang , Dongqi Fu , Dawei Zhou

Real-world networks usually have a property of node heterophily, that is, the connected nodes usually have different features or different labels. This heterophily issue has been extensively studied in homogeneous graphs but remains…

Social and Information Networks · Computer Science 2025-06-27 Ziyu Zheng , Yaming Yang , Ziyu Guan , Wei Zhao , Weigang Lu

With emergence of blockchain technologies and the associated cryptocurrencies, such as Bitcoin, understanding network dynamics behind Blockchain graphs has become a rapidly evolving research direction. Unlike other financial networks, such…

Heterogeneous graphs are present in various domains, such as social networks, recommendation systems, and biological networks. Unlike homogeneous graphs, heterogeneous graphs consist of multiple types of nodes and edges, each representing…

Social and Information Networks · Computer Science 2024-10-17 Hritaban Ghosh , Chen Changyu , Arunesh Sinha , Shamik Sural

Given a stream of heterogeneous graphs containing different types of nodes and edges, how can we spot anomalous ones in real-time while consuming bounded memory? This problem is motivated by and generalizes from its application in security…

Social and Information Networks · Computer Science 2016-02-23 Emaad A. Manzoor , Sadegh Momeni , Venkat N. Venkatakrishnan , Leman Akoglu

A classic measure of ecological stability describes the tendency of a community to return to equilibrium after small perturbation. While many advances show how the network structure of these communities severely constrains such tendencies,…

Populations and Evolution · Quantitative Biology 2015-06-09 Gang Yan , Neo D. Martinez , Yang-Yu Liu

Stream graphs are a very useful mode of representation for temporal network data, whose richness offers a wide range of possible approaches. The various methods aimed at generalising the classical approaches applied to static networks are…

Social and Information Networks · Computer Science 2021-04-14 Mehdi Djellabi , Bertrand Jouve

Recent studies on Graph Neural Networks(GNNs) provide both empirical and theoretical evidence supporting their effectiveness in capturing structural patterns on both homophilic and certain heterophilic graphs. Notably, most real-world…

Machine Learning · Computer Science 2023-10-17 Haitao Mao , Zhikai Chen , Wei Jin , Haoyu Han , Yao Ma , Tong Zhao , Neil Shah , Jiliang Tang

Graph neural networks (GNNs) have been proved powerful in graph-oriented tasks. However, many real-world graphs are heterophilous, challenging the homophily assumption of classical GNNs. To solve the universality problem, many studies…

Machine Learning · Computer Science 2023-10-09 Shengbo Gong , Jiajun Zhou , Chenxuan Xie , Qi Xuan

Homophily, as a measure, has been critical to increasing our understanding of graph neural networks (GNNs). However, to date this measure has only been analyzed in the context of static graphs. In our work, we explore homophily in dynamic…

Machine Learning · Computer Science 2025-04-30 Michael Ito , Danai Koutra , Jenna Wiens

Graph is a fundamental mathematical structure in characterizing relations between different objects and has been widely used on various learning tasks. Most methods implicitly assume a given graph to be accurate and complete. However, real…

Machine Learning · Computer Science 2024-03-07 Xuanting Xie , Zhao Kang , Wenyu Chen
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