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Matrix Factorization (MF) has been widely applied in machine learning and data mining. A large number of algorithms have been studied to factorize matrices. Among them, stochastic gradient descent (SGD) is a commonly used method.…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-30 Yuanhang Yu , Dong Wen , Ying Zhang , Xiaoyang Wang , Wenjie Zhang , Xuemin Lin

This manual describes the library of conjugate gradients codes CCGPAK, which solves system of complex linear system of equations. The library is written in FORTRAN90 and is highly portable. The codes are general and provide mechanism for…

Mathematical Software · Computer Science 2012-08-27 Piotr J. Flatau

In the last several years, tightly coupled PC clusters have become widely applied, cost effective resources for lattice gauge computations. This paper discusses the practice of building such clusters, in particular balanced design…

High Energy Physics - Lattice · Physics 2009-11-10 D. J. Holmgren

The preconditioned conjugate gradient (PCG) algorithm is one of the most popular algorithms for solving large-scale linear systems Ax = b, where A is a symmetric positive definite matrix. Rather than computing residuals directly, it updates…

Numerical Analysis · Mathematics 2025-11-19 Thomas Bake , Erin Carson , Yuxin Ma

Linear programming (LP) relaxation is a standard technique for solving hard combinatorial optimization (CO) problems. Here we present a gradient descent algorithm which exploits the special structure of some LP relaxations induced by CO…

Optimization and Control · Mathematics 2020-11-17 Alexey Antonov

Linear solvers are key components in any software platform for scientific and engineering computing. The solution of large and sparse linear systems lies at the core of physics-driven numerical simulations relying on partial differential…

Numerical Analysis · Mathematics 2026-04-16 Massimo Bernaschi , Mauro G. Carrozzo , Alessandro Celestini , Giacomo Piperno , Pasqua D'Ambra

We present a set of programming tools (classes and functions written in C++ and based on Message Passing Interface) for fast development of generic parallel (and non-parallel) lattice simulations. They are collectively called MDP 1.2. These…

High Energy Physics - Lattice · Physics 2009-10-31 Massimo Di Pierro

Efficient numerical solvers for partial differential equations empower science and engineering. One of the commonly employed numerical solvers is the preconditioned conjugate gradient (PCG) algorithm which can solve large systems to a given…

Numerical Analysis · Mathematics 2023-09-07 Yichen Li , Peter Yichen Chen , Tao Du , Wojciech Matusik

Lagrange coded computation (LCC) is essential to solving problems about matrix polynomials in a coded distributed fashion; nevertheless, it can only solve the problems that are representable as matrix polynomials. In this paper, we propose…

Information Theory · Computer Science 2022-05-23 Navneet Agrawal , Yuqin Qiu , Matthias Frey , Igor Bjelakovic , Setareh Maghsudi , Slawomir Stanczak , Jingge Zhu

When considering different hardware platforms, not just the time-to-solution can be of importance but also the energy necessary to reach it. This is not only the case with battery powered and mobile devices but also with high-performance…

Performance · Computer Science 2020-06-30 Philip Heinisch , Katharina Ostaszewski , Hendrik Ranocha

Many problems in computational science and engineering involve partial differential equations and thus require the numerical solution of large, sparse (non)linear systems of equations. Multigrid is known to be one of the most efficient…

Mathematical Software · Computer Science 2014-06-23 Harald Koestler , Christian Schmitt , Sebastian Kuckuk , Frank Hannig , Juergen Teich , Ulrich Ruede

Computing disconnected diagrams in Lattice QCD (operator insertion in a quark loop) entails the computationally demanding problem of taking the trace of the all to all quark propagator. We first outline the basic algorithm used to compute a…

High Energy Physics - Lattice · Physics 2016-11-09 Arjun Singh Gambhir , Andreas Stathopoulos , Kostas Orginos , Boram Yoon , Rajan Gupta , Sergey Syritsyn

A high fidelity flow simulation for complex geometries for high Reynolds number ($Re$) flow is still very challenging, which requires more powerful computational capability of HPC system. However, the development of HPC with traditional CPU…

Computational Physics · Physics 2022-03-03 Chuangchao Ye , Pengjunyi Zhang , Rui Yan , Dejun Sun , Zhenhua Wan

We present a novel, hardware-agnostic implementation strategy for lattice Boltzmann (LB) simulations, which yields massive performance on homogeneous and heterogeneous many-core platforms. Based solely on C++17 Parallel Algorithms, our…

Computational Physics · Physics 2021-05-11 Jonas Latt , Christophe Coreixas , Joël Beny

We discuss a substantial update to the Grid software library for Lattice QCD, enabling it to port to multiple GPU architectures while retaining CPU vectorisation and SIMD execution within OpenMP threads. The GPU environments supported…

High Energy Physics - Lattice · Physics 2022-03-15 Peter Boyle , Guido Cossu , Gianluca Filaci , Christoph Lehner , Antonin Portelli , Azusa Yamaguchi

The electrical and electronic engineering has used parallel programming to solve its large scale complex problems for performance reasons. However, as parallel programming requires a non-trivial distribution of tasks and data, developers…

Distributed, Parallel, and Cluster Computing · Computer Science 2011-07-05 Antonio Wendell De Oliveira Rodrigues , Frédéric Guyomarc'H , Jean-Luc Dekeyser , Yvonnick Le Menach

Heterogeneous computing platforms consisting of general purpose processors (GPPs) and graphics processing units (GPUs) have become commonplace in personal mobile devices and embedded systems. For years, programming of these platforms was…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-11 Jani Boutellier , Ilkka Hautala

In the past decade, high performance compute capabilities exhibited by heterogeneous GPGPU platforms have led to the popularity of data parallel programming languages such as CUDA and OpenCL. Such languages, however, involve a steep…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-09-17 Anirban Ghose , Siddharth Singh , Vivek Kulaharia , Lokesh Dokara , Srijeeta Maity , Soumyajit Dey

This paper describes a state-of-the-art parallel Lattice QCD Monte Carlo code for staggered fermions, purposely designed to be portable across different computer architectures, including GPUs and commodity CPUs. Portability is achieved…

The development of multicore architectures supporting parallel data processing has led to a paradigm shift, which affects communication systems significantly. This article provides a scalable parallel approach of an iterative LDPC decoder,…

Information Theory · Computer Science 2020-01-31 Jan Broulim , Alexander Ayriyan , Vjaceslav Georgiev , Hovik Grigorian