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Counterfactual generation offers a principled framework for simulating hypothetical changes in medical imaging, with potential applications in understanding disease mechanisms and generating physiologically plausible data. However,…

Image and Video Processing · Electrical Eng. & Systems 2025-08-25 Pengwei Sun , Wei Peng , Lun Yu Li , Yixin Wang , Kilian M. Pohl

3D brain MRI studies often examine subtle morphometric differences between cohorts that are hard to detect visually. Given the high cost of MRI acquisition, these studies could greatly benefit from image syntheses, particularly…

Computer Vision and Pattern Recognition · Computer Science 2025-09-12 Binxu Li , Wei Peng , Mingjie Li , Ehsan Adeli , Kilian M. Pohl

The discovery of patient-specific imaging markers that are predictive of future disease outcomes can help us better understand individual-level heterogeneity of disease evolution. In fact, deep learning models that can provide data-driven…

Computer Vision and Pattern Recognition · Computer Science 2022-08-05 Amar Kumar , Anjun Hu , Brennan Nichyporuk , Jean-Pierre R. Falet , Douglas L. Arnold , Sotirios Tsaftaris , Tal Arbel

Estimating the counterfactual outcome of treatment is essential for decision-making in public health and clinical science, among others. Often, treatments are administered in a sequential, time-varying manner, leading to an exponentially…

Machine Learning · Statistics 2024-07-16 Shenghao Wu , Wenbin Zhou , Minshuo Chen , Shixiang Zhu

Deep learning models in medical imaging often fail when deployed in new clinical environments due to distribution shifts in demographics, scanner hardware, or acquisition protocols. A central challenge is underspecification, where models…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Moritz Stammel , Fabio De Sousa Ribeiro , Raghav Mehta , Mélanie Roschewitz , Ben Glocker

Generative AI models hold great potential in creating synthetic brain MRIs that advance neuroimaging studies by, for example, enriching data diversity. However, the mainstay of AI research only focuses on optimizing the visual quality (such…

Image and Video Processing · Electrical Eng. & Systems 2023-10-10 Wei Peng , Tomas Bosschieter , Jiahong Ouyang , Robert Paul , Ehsan Adeli , Qingyu Zhao , Kilian M. Pohl

Foundation models trained on web-scraped datasets propagate societal biases to downstream tasks. While counterfactual generation enables bias analysis, existing methods introduce artifacts by modifying contextual elements like clothing and…

Computer Vision and Pattern Recognition · Computer Science 2024-12-13 Kirill Sirotkin , Marcos Escudero-Viñolo , Pablo Carballeira , Mayug Maniparambil , Catarina Barata , Noel E. O'Connor

Human anatomy, morphology, and associated diseases can be studied using medical imaging data. However, access to medical imaging data is restricted by governance and privacy concerns, data ownership, and the cost of acquisition, thus…

Deep neural networks have brought remarkable breakthroughs in medical image analysis. However, due to their data-hungry nature, the modest dataset sizes in medical imaging projects might be hindering their full potential. Generating…

Data diversity is critical to success when training deep learning models. Medical imaging data sets are often imbalanced as pathologic findings are generally rare, which introduces significant challenges when training deep learning models.…

Computer Vision and Pattern Recognition · Computer Science 2018-09-17 Hoo-Chang Shin , Neil A Tenenholtz , Jameson K Rogers , Christopher G Schwarz , Matthew L Senjem , Jeffrey L Gunter , Katherine Andriole , Mark Michalski

Clinical decision making requires counterfactual reasoning based on a factual medical image and thus necessitates causal image synthesis. To this end, we present a novel method for modeling the causality between demographic variables,…

Image and Video Processing · Electrical Eng. & Systems 2023-03-28 Yujia Li , Jiong Shi , S. Kevin Zhou

The usage of medical image data for the training of large-scale machine learning approaches is particularly challenging due to its scarce availability and the costly generation of data annotations, typically requiring the engagement of…

Computer Vision and Pattern Recognition · Computer Science 2024-06-26 Joshua Niemeijer , Jan Ehrhardt , Hristina Uzunova , Heinz Handels

Due to the limited availability of medical data, deep learning approaches for medical image analysis tend to generalise poorly to unseen data. Augmenting data during training with random transformations has been shown to help and became a…

Image and Video Processing · Electrical Eng. & Systems 2022-10-04 Tian Xia , Pedro Sanchez , Chen Qin , Sotirios A. Tsaftaris

We present a general framework for evaluating image counterfactuals. The power and flexibility of deep generative models make them valuable tools for learning mechanisms in structural causal models. However, their flexibility makes…

Computer Vision and Pattern Recognition · Computer Science 2023-03-03 Miguel Monteiro , Fabio De Sousa Ribeiro , Nick Pawlowski , Daniel C. Castro , Ben Glocker

Recent years have witnessed a rapid development of deep generative models for creating synthetic media, such as images and videos. While the practical applications of these models in everyday tasks are enticing, it is crucial to assess the…

Computer Vision and Pattern Recognition · Computer Science 2024-05-01 Mike Laszkiewicz , Imant Daunhawer , Julia E. Vogt , Asja Fischer , Johannes Lederer

A machine learning model, under the influence of observed or unobserved confounders in the training data, can learn spurious correlations and fail to generalize when deployed. For image classifiers, augmenting a training dataset using…

Machine Learning · Computer Science 2022-12-13 Abbavaram Gowtham Reddy , Saloni Dash , Amit Sharma , Vineeth N Balasubramanian

Generative modelling and synthetic data can be a surrogate for real medical imaging datasets, whose scarcity and difficulty to share can be a nuisance when delivering accurate deep learning models for healthcare applications. In recent…

Image and Video Processing · Electrical Eng. & Systems 2024-02-27 Virginia Fernandez , Walter Hugo Lopez Pinaya , Pedro Borges , Mark S. Graham , Tom Vercauteren , M. Jorge Cardoso

We propose an architecture for training generative models of counterfactual conditionals of the form, 'can we modify event A to cause B instead of C?', motivated by applications in robot control. Using an 'adversarial training' paradigm, an…

Robotics · Computer Science 2020-09-23 Simón C. Smith , Subramanian Ramamoorthy

We consider the task of counterfactual estimation from observational imaging data given a known causal structure. In particular, quantifying the causal effect of interventions for high-dimensional data with neural networks remains an open…

Machine Learning · Computer Science 2022-02-22 Pedro Sanchez , Sotirios A. Tsaftaris

Counterfactual data augmentation has recently emerged as a method to mitigate confounding biases in the training data. These biases, such as spurious correlations, arise due to various observed and unobserved confounding variables in the…

Machine Learning · Computer Science 2023-11-22 Abbavaram Gowtham Reddy , Saketh Bachu , Saloni Dash , Charchit Sharma , Amit Sharma , Vineeth N Balasubramanian
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