English
Related papers

Related papers: TriCCo -- a cubulation-based method for computing …

200 papers

This article empirically examines the computational cost of solving a known hard problem, graph clustering, using novel purpose-built computer hardware. We express the graph clustering problem as an intra-cluster distance or dissimilarity…

Social and Information Networks · Computer Science 2020-03-10 Pierre Miasnikof , Seo Hong , Yuri Lawryshyn

Advancements in Earth system science have seen a surge in diverse datasets. Earth System Data Cubes (ESDCs) have been introduced to efficiently handle this influx of high-dimensional data. ESDCs offer a structured, intuitive framework for…

Understanding the higher-order interactions within network data is a key objective of network science. Surveys of metadata triangles (or patterned 3-cycles in metadata-enriched graphs) are often of interest in this pursuit. In this work, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-07-27 Trevor Steil , Tahsin Reza , Keita Iwabuchi , Benjamin W. Priest , Geoffrey Sanders , Roger Pearce

Background: The development, optimization and validation of protein modeling methods require efficient tools for structural comparison. Frequently, a large number of models need to be compared with the target native structure. The main…

Biomolecules · Quantitative Biology 2013-03-04 Jamróz Michał , Koliński Andrzej

Grid visualizations are widely used in many applications to visually explain a set of data and their proximity relationships. However, existing layout methods face difficulties when dealing with the inherent cluster structures within the…

Human-Computer Interaction · Computer Science 2025-08-27 Yuxing Zhou , Weikai Yang , Jiashu Chen , Changjian Chen , Zhiyang Shen , Xiaonan Luo , Lingyun Yu , Shixia Liu

Clustering and visualizing high-dimensional (HD) data are important tasks in a variety of fields. For example, in bioinformatics, they are crucial for analyses of single-cell data such as mass cytometry (CyTOF) data. Some of the most…

Quantitative Methods · Quantitative Biology 2021-07-19 Joshua M. Scurll

Several methods of triclustering of three dimensional data require the specification of the cluster size in each dimension. This introduces a certain degree of arbitrariness. To address this issue, we propose a new method, namely the…

Machine Learning · Computer Science 2021-09-23 Dina Faneva Andriantsiory , Joseph Ben Geloun , Mustapha Lebbah

We propose a new numerical algorithm to construct a structured numerical elliptic grid of a doubly connected domain. Our method is applicable to domains with boundaries defined by two contour lines of a two-dimensional function. The…

Numerical Analysis · Mathematics 2018-08-14 Matthias Wiesenberger , Markus Held , Lukas Einkemmer

Learning implicit representations has been a widely used solution for surface reconstruction from 3D point clouds. The latest methods infer a distance or occupancy field by overfitting a neural network on a single point cloud. However,…

Computer Vision and Pattern Recognition · Computer Science 2023-08-28 Chao Chen , Yu-Shen Liu , Zhizhong Han

Trajectory clustering enables the discovery of common patterns in trajectory data. Current methods of trajectory clustering rely on a distance measure between two points in order to measure the dissimilarity between two trajectories. The…

Artificial Intelligence · Computer Science 2023-10-31 Zi Jing Wang , Ye Zhu , Kai Ming Ting

Graphs and networks are used to model interactions in a variety of contexts. There is a growing need to quickly assess the characteristics of a graph in order to understand its underlying structure. Some of the most useful metrics are…

Social and Information Networks · Computer Science 2014-12-02 Tamara G. Kolda , Ali Pinar , Todd Plantenga , C. Seshadhri , Christine Task

This paper presents a graph bundling algorithm that agglomerates edges taking into account both spatial proximity as well as user-defined criteria in order to reveal patterns that were not perceivable with previous bundling techniques. Each…

Graphics · Computer Science 2015-04-13 Daniel C. Moura

This paper presents a hybrid approach to spatial indexing of two dimensional data. It sheds new light on the age old problem by thinking of the traditional algorithms as working with images. Inspiration is drawn from an analogous situation…

Data Structures and Algorithms · Computer Science 2016-11-17 Lukasz A. Machowski , Tshilidzi Marwala

We propose a modified coupled cluster Monte Carlo algorithm that stochastically samples connected terms within the truncated Baker--Campbell--Hausdorff expansion of the similarity transformed Hamiltonian by construction of coupled cluster…

Chemical Physics · Physics 2019-06-19 Charles J. C. Scott , Roberto Di Remigio , T. Daniel Crawford , Alex J. W. Thom

We present a simple set of data structures, and a collection of methods for constructing and updating the structures, designed to support the use of cohesive elements in simulations of fracture and fragmentation. Initially all interior…

Materials Science · Physics 2016-08-31 Anna Pandolfi , Michael Ortiz

We propose a systematic approach for registering cross-source point clouds. The compelling need for cross-source point cloud registration is motivated by the rapid development of a variety of 3D sensing techniques, but many existing…

Computer Vision and Pattern Recognition · Computer Science 2017-06-07 Xiaoshui Huang , Jian Zhang , Lixin Fan , Qiang Wu , Chun Yuan

The Particle-In-Cell (PIC) method for plasma simulation tracks particle phase space information using particle and grid data structures. High computational costs in 2D and 3D device-scale PIC simulations necessitate parallelization, with…

Computational Physics · Physics 2025-06-27 Libn Varghese , Bhaskar Chaudhury , Miral Shah , Mainak Bandyopadhyay

Recognition of occluded objects in unseen indoor environments is a challenging problem for mobile robots. This work proposes a new slicing-based topological descriptor that captures the 3D shape of object point clouds to address this…

Computer Vision and Pattern Recognition · Computer Science 2022-05-17 Ekta U. Samani , Ashis G. Banerjee

Image-to-3D models increasingly rely on hierarchical generation to disentangle geometry and texture. However, the design choices underlying these two-stage models--particularly the optimal choice of intermediate geometric…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Rishabh Kabra , Drew A. Hudson , Sjoerd van Steenkiste , Joao Carreira , Niloy J. Mitra

The scale-space method is a well-established framework that constructs a hierarchical representation of an input signal and facilitates coarse-to-fine visual reasoning. Considering the terrain elevation function as the input signal, the…

Information Retrieval · Computer Science 2024-09-11 Haoan Feng , Yunting Song , Leila De Floriani