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Despite considerable progress in developing artificial intelligence (AI) algorithms for prostate cancer detection from whole slide images, the clinical applicability of these models remains limited due to variability in pathological…

Tissues and Organs · Quantitative Biology 2024-06-12 T. J. Hart , Chloe Engler Hart , Spencer Hopson , Paul M. Urie , Dennis Della Corte

Deep learning for clinical applications is subject to stringent performance requirements, which raises a need for large labeled datasets. However, the enormous cost of labeling medical data makes this challenging. In this paper, we build a…

Computer Vision and Pattern Recognition · Computer Science 2018-09-11 Weicheng Kuo , Christian Häne , Esther Yuh , Pratik Mukherjee , Jitendra Malik

Machine Learning (ML)-based detectors are becoming essential to counter the proliferation of malware. However, common ML algorithms are not designed to cope with the dynamic nature of real-world settings, where both legitimate and malicious…

Determining early-stage prognostic markers and stratifying patients for effective treatment are two key challenges for improving outcomes for melanoma patients. Previous studies have used tumour transcriptome data to stratify patients into…

Image and Video Processing · Electrical Eng. & Systems 2022-02-24 Lucy Godson , Navid Alemi , Jeremie Nsengimana , Graham P. Cook , Emily L. Clarke , Darren Treanor , D. Timothy Bishop , Julia Newton-Bishop , Ali Gooya

The rapid global aging trend has led to an increase in dementia cases, including Alzheimer's disease, underscoring the urgent need for early and accurate diagnostic methods. Traditional diagnostic techniques, such as cognitive tests,…

Machine Learning · Computer Science 2024-09-06 Juan A. Berrios Moya

Histopathological images provide rich information for disease diagnosis. Large numbers of histopathological images have been digitized into high resolution whole slide images, opening opportunities in developing computational image analysis…

Image and Video Processing · Electrical Eng. & Systems 2020-11-06 Jiayun Li , Wenyuan Li , Anthony Sisk , Huihui Ye , W. Dean Wallace , William Speier , Corey W. Arnold

In microscopy, the time burden and cost of acquiring and annotating large datasets that many deep learning models take as a prerequisite, often appears to make these methods impractical. Can this requirement for annotated data be relaxed?…

Image and Video Processing · Electrical Eng. & Systems 2020-11-10 Adrian Shajkofci , Michael Liebling

Machine learning has been widely adopted for medical image analysis in recent years given its promising performance in image segmentation and classification tasks. As a data-driven science, the success of machine learning, in particular…

Computer Vision and Pattern Recognition · Computer Science 2020-07-06 Chengliang Dai , Shuo Wang , Yuanhan Mo , Kaichen Zhou , Elsa Angelini , Yike Guo , Wenjia Bai

Farmers in remote areas need quick and reliable methods for identifying plant diseases, yet they often lack access to laboratories or high-performance computing resources. Deep learning models can detect diseases from leaf images with high…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 Mohammed Mudassir Uddin , Shahnawaz Alam , Mohammed Kaif Pasha , Dr Tasneem Bano Rehman , Dr Fahmina Taranum , Afroze Begum

Avoiding out-of-distribution (OOD) data is critical for training supervised machine learning models in the medical imaging domain. Furthermore, obtaining labeled medical data is difficult and expensive since it requires expert annotators…

Computer Vision and Pattern Recognition · Computer Science 2022-10-05 Suraj Kothawade , Akshit Srivastava , Venkat Iyer , Ganesh Ramakrishnan , Rishabh Iyer

In the field of image classification, existing methods often struggle with biased or ambiguous data, a prevalent issue in real-world scenarios. Current strategies, including semi-supervised learning and class blending, offer partial…

Computer Vision and Pattern Recognition · Computer Science 2024-04-30 Lars Schmarje , Vasco Grossmann , Claudius Zelenka , Johannes Brünger , Reinhard Koch

Analysis of microscopy images is one important tool in many fields of biomedical research, as it allows the quantification of a multitude of parameters at the cellular level. However, manual counting of these images is both tiring and…

Computer Vision and Pattern Recognition · Computer Science 2013-11-13 P. A Nogueira

Microscopy data collections are becoming larger and more frequent. Accurate and precise quantitative analysis tools like cell instance segmentation are necessary to benefit from them. This is challenging due to the variability in the data,…

Computer Vision and Pattern Recognition · Computer Science 2024-02-28 Ram J. Zaveri , Voke Brume , Gianfranco Doretto

MR imaging is a valuable diagnostic tool allowing to non-invasively visualize patient anatomy and pathology with high soft-tissue contrast. However, MRI acquisition is typically time-consuming, leading to patient discomfort and increased…

Image and Video Processing · Electrical Eng. & Systems 2025-12-23 Jan Nikolas Morshuis , Matthias Hein , Christian F. Baumgartner

Model-based disease mapping remains a fundamental policy-informing tool in the fields of public health and disease surveillance. Hierarchical Bayesian models have emerged as the state-of-the-art approach for disease mapping since they are…

Machine Learning · Computer Science 2023-07-18 Elizaveta Semenova , Swapnil Mishra , Samir Bhatt , Seth Flaxman , H Juliette T Unwin

The success of automated medical image analysis depends on large-scale and expert-annotated training sets. Unsupervised domain adaptation (UDA) has been raised as a promising approach to alleviate the burden of labeled data collection.…

Computer Vision and Pattern Recognition · Computer Science 2023-07-28 Jianan Fan , Dongnan Liu , Hang Chang , Heng Huang , Mei Chen , Weidong Cai

In this paper, a semi-automatic annotation of bacteria genera and species from DIBaS dataset is implemented using clustering and thresholding algorithms. A Deep learning model is trained to achieve the semantic segmentation and…

Image and Video Processing · Electrical Eng. & Systems 2022-08-24 Chethan Reddy G. P. , Pullagurla Abhijith Reddy , Vidyashree R. Kanabur , Deepu Vijayasenan , Sumam S. David , Sreejith Govindan

We pose that microscopy offers an ideal real-world experimental environment for the development and deployment of active Bayesian and reinforcement learning methods. Indeed, the tremendous progress achieved by machine learning (ML) and…

Disordered Systems and Neural Networks · Physics 2022-10-14 Sergei V. Kalinin , Rama Vasudevan , Yongtao Liu , Ayana Ghosh , Kevin Roccapriore , Maxim Ziatdinov

Malaria is one of the deadliest diseases in the world, every year millions of people become victims of this disease and many even lose their lives. Medical professionals and the government could take accurate measures to protect the people…

Populations and Evolution · Quantitative Biology 2025-01-03 Adithya Rajnarayanan , Manoj Kumar , Abdessamad Tridane

Data sharing in the medical image analysis field has potential yet remains underappreciated. The aim is often to share datasets efficiently with other sites to train models effectively. One possible solution is to avoid transferring the…

Image and Video Processing · Electrical Eng. & Systems 2025-02-25 Muyang Li , Can Cui , Quan Liu , Ruining Deng , Tianyuan Yao , Marilyn Lionts , Yuankai Huo