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This paper presents a novel framework for processing volumetric medical information using Visual Transformers (ViTs). First, We extend the state-of-the-art Swin Transformer model to the 3D medical domain. Second, we propose a new approach…

Image and Video Processing · Electrical Eng. & Systems 2024-06-06 Cristhian Forigua , Maria Escobar , Pablo Arbelaez

In this paper, we adopt 3D Convolutional Neural Networks to segment volumetric medical images. Although deep neural networks have been proven to be very effective on many 2D vision tasks, it is still challenging to apply them to 3D tasks…

Computer Vision and Pattern Recognition · Computer Science 2018-08-03 Zhuotun Zhu , Yingda Xia , Wei Shen , Elliot K. Fishman , Alan L. Yuille

Many functional and structural neuroimaging studies call for accurate morphometric segmentation of different brain structures starting from image intensity values of MRI scans. Current automatic (multi-) atlas-based segmentation strategies…

Image and Video Processing · Electrical Eng. & Systems 2019-09-27 Dennis Bontempi , Sergio Benini , Alberto Signoroni , Michele Svanera , Lars Muckli

Medical image segmentation plays a crucial role in advancing healthcare systems for disease diagnosis and treatment planning. The u-shaped architecture, popularly known as U-Net, has proven highly successful for various medical image…

Computer Vision and Pattern Recognition · Computer Science 2023-10-13 Jieneng Chen , Jieru Mei , Xianhang Li , Yongyi Lu , Qihang Yu , Qingyue Wei , Xiangde Luo , Yutong Xie , Ehsan Adeli , Yan Wang , Matthew Lungren , Lei Xing , Le Lu , Alan Yuille , Yuyin Zhou

Brain tumor segmentation is a critical task for patient's disease management. In order to automate and standardize this task, we trained multiple U-net like neural networks, mainly with deep supervision and stochastic weight averaging, on…

Image and Video Processing · Electrical Eng. & Systems 2020-11-30 Theophraste Henry , Alexandre Carre , Marvin Lerousseau , Theo Estienne , Charlotte Robert , Nikos Paragios , Eric Deutsch

Structural magnetic resonance imaging (MRI) has been widely utilized for analysis and diagnosis of brain diseases. Automatic segmentation of brain tumors is a challenging task for computer-aided diagnosis due to low-tissue contrast in the…

Image and Video Processing · Electrical Eng. & Systems 2020-11-22 Mohammad Hamghalam , Baiying Lei , Tianfu Wang

We propose a new deep learning method for tumour segmentation when dealing with missing imaging modalities. Instead of producing one network for each possible subset of observed modalities or using arithmetic operations to combine feature…

Image and Video Processing · Electrical Eng. & Systems 2019-10-22 Reuben Dorent , Samuel Joutard , Marc Modat , Sébastien Ourselin , Tom Vercauteren

Accurate brain tumor segmentation remains a challenging task due to structural complexity and great individual differences of gliomas. Leveraging the pre-eminent detail resilience of CRF and spatial feature extraction capacity of V-net, we…

Image and Video Processing · Electrical Eng. & Systems 2024-11-22 Lan Jiang , Yuchao Zheng , Miao Yu , Haiqing Zhang , Fatemah Aladwani , Alessandro Perelli

Automatic segmentation of multiple organs and tumors from 3D medical images such as magnetic resonance imaging (MRI) and computed tomography (CT) scans using deep learning methods can aid in diagnosing and treating cancer. However, organs…

Image and Video Processing · Electrical Eng. & Systems 2022-07-25 Hao Li , Yang Nan , Javier Del Ser , Guang Yang

Learning meaningful and interpretable representations from high-dimensional volumetric magnetic resonance (MR) images is essential for advancing personalized medicine. While Vision Transformers (ViTs) have shown promise in handling image…

Computer Vision and Pattern Recognition · Computer Science 2024-09-13 Qingqiao Hu , Daoan Zhang , Jiebo Luo , Zhenyu Gong , Benedikt Wiestler , Jianguo Zhang , Hongwei Bran Li

This article presents a multiscale patch based convolutional neural network for the automatic segmentation of brain tumors in multi-modality 3D MR images. We use multiscale deep supervision and inputs to train a convolutional network. We…

Computer Vision and Pattern Recognition · Computer Science 2017-10-09 Jean Stawiaski

The brain tumor segmentation task aims to classify tissue into the whole tumor (WT), tumor core (TC), and enhancing tumor (ET) classes using multimodel MRI images. Quantitative analysis of brain tumors is critical for clinical decision…

Image and Video Processing · Electrical Eng. & Systems 2020-12-15 Saqib Qamar , Parvez Ahmad , Linlin Shen

Brain tumor segmentation is one of the most challenging problems in medical image analysis. The goal of brain tumor segmentation is to generate accurate delineation of brain tumor regions. In recent years, deep learning methods have shown…

Image and Video Processing · Electrical Eng. & Systems 2021-11-18 Zhihua Liu , Lei Tong , Zheheng Jiang , Long Chen , Feixiang Zhou , Qianni Zhang , Xiangrong Zhang , Yaochu Jin , Huiyu Zhou

Urinary bladder cancer surveillance requires tracking tumor sites across repeated interventions, yet the deformable and hollow bladder lacks stable landmarks for orientation. While blood vessels visible during endoscopy offer a…

Computer Vision and Pattern Recognition · Computer Science 2026-02-11 Franziska Krauß , Matthias Ege , Zoltan Lovasz , Albrecht Bartz-Schmidt , Igor Tsaur , Oliver Sawodny , Carina Veil

This paper proposes a high-precision semantic segmentation method based on an improved TransUNet architecture to address the challenges of complex lesion structures, blurred boundaries, and significant scale variations in skin lesion…

Image and Video Processing · Electrical Eng. & Systems 2025-08-21 Xin Wang , Xiaopei Zhang , Xingang Wang

Tumor volume segmentation on MRI is a challenging and time-consuming process that is performed manually in typical clinical settings. This work presents an approach to automated delineation of head and neck tumors on MRI scans, developed in…

Image and Video Processing · Electrical Eng. & Systems 2025-01-10 Andrei Iantsen

There are many approaches to weakly-supervised training of networks to segment 2D images. By contrast, existing approaches to segmenting volumetric images rely on full-supervision of a subset of 2D slices of the 3D volume. We propose an…

Computer Vision and Pattern Recognition · Computer Science 2022-06-06 Udaranga Wickramasinghe , Patrick M. Jensen , Mian Shah , Jiancheng Yang , Pascal Fua

The clinical management of breast cancer depends on an accurate understanding of the tumor and its anatomical context to adjacent tissues and landmark structures. This context may be provided by semantic segmentation methods; however,…

Image and Video Processing · Electrical Eng. & Systems 2023-11-29 Arda Pekis , Vignesh Kannan , Evandros Kaklamanos , Anu Antony , Snehal Patel , Tyler Earnest

A major challenge in brain tumor treatment planning and quantitative evaluation is determination of the tumor extent. The noninvasive magnetic resonance imaging (MRI) technique has emerged as a front-line diagnostic tool for brain tumors…

Computer Vision and Pattern Recognition · Computer Science 2017-06-06 Hao Dong , Guang Yang , Fangde Liu , Yuanhan Mo , Yike Guo

In this study, an automated three dimensional (3D) deep segmentation approach for detecting gliomas in 3D pre-operative MRI scans is proposed. Then, a classi-fication algorithm based on random forests, for survival prediction is presented.…

Image and Video Processing · Electrical Eng. & Systems 2019-11-20 Mehdi Amian , Mohammadreza Soltaninejad
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