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Data is a valuable asset, and sharing it as a product across organizations is key to building comprehensive and useful insights in fields such as science and industry. Before sharing, data often requires transformation to comply with…

Social and Information Networks · Computer Science 2025-03-18 Sepideh Masoudi

We argue for the need for a new generation of data science solutions that can democratize recent advances in data engineering and artificial intelligence for non-technical users from various disciplines, enabling them to unlock the full…

Open Science aims to foster openness and collaboration in research, leading to more significant scientific and social impact. However, practicing Open Science comes with several challenges and is currently not properly rewarded. In this…

Software Engineering · Computer Science 2024-05-21 Edson OliveiraJr , Fernanda Madeiral , Alcemir Rodrigues Santos , Christina von Flach , Sergio Soares

Structuring data analysis projects, that is, defining the layout of files and folders needed to analyze data using existing tools and novel code, largely follows personal preferences. In this work, we look at the structure of several data…

Human-Computer Interaction · Computer Science 2024-10-15 Luca Visentin , Luca Munaron , Federico Alessandro Ruffinatti

The rapid growth of publicly available textual resources, such as lexicons and domain-specific corpora, presents challenges in efficiently identifying relevant resources. While repositories are emerging, they often lack advanced search and…

Databases · Computer Science 2025-08-01 Anaïs Ollagnier , Aline Menin

So far, the relationship between open science and software engineering expertise has largely focused on the open release of software engineering research insights and reproducible artifacts, in the form of open-access papers, open data, and…

Software Engineering · Computer Science 2024-09-17 Cynthia C. S. Liem , Andrew M. Demetriou

The recent explosion of recorded digital data and its processed derivatives threatens to overwhelm researchers when analysing their experimental data or when looking up data items in archives and file systems. While current hardware…

Open science describes the movement of making any research artefact available to the public and includes, but is not limited to, open access, open data, and open source. While open science is becoming generally accepted as a norm in other…

Software Engineering · Computer Science 2021-02-10 Daniel Méndez Fernández , Daniel Graziotin , Stefan Wagner , Heidi Seibold

Metadata, often termed "data about data," is crucial for organizing, understanding, and managing vast omics datasets. It aids in efficient data discovery, integration, and interpretation, enabling users to access, comprehend, and utilize…

Biosciences have been revolutionized by next generation sequencing (NGS) technologies in last years, leading to new perspectives in medical, industrial and environmental applications. And although our motivation comes from biosciences, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-01-16 Bruno Dantas , Calmenelias Fleitas , Alexandre P. Francisco , José Simão , Cátia Vaz

Federated machine learning has great promise to overcome the input privacy challenge in machine learning. The appearance of several projects capable of simulating federated learning has led to a corresponding rapid progress on algorithmic…

Every research project necessitates data, often requiring sharing and collaborative review within a team. However, there is a dearth of good open-source data sharing and reviewing services. Existing file-sharing services generally mandate…

Databases · Computer Science 2024-06-27 Lexington Whalen , Homayoun Valafar

Linked Data (LD) as a web--based technology enables in principle the seamless, machine--supported integration, interplay and augmentation of all kinds of knowledge, into what has been labeled a huge knowledge graph. Despite decades of web…

Digital Libraries · Computer Science 2022-05-02 Rick Szostak , Richard P. Smiraglia , Andrea Scharnhorst , Aida Slavic , Daniel Martínez-Ávila , Tobias Renwick

In recent years, data and computing resources are typically distributed in the devices of end users, various regions or organizations. Because of laws or regulations, the distributed data and computing resources cannot be directly shared…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-28 Ji Liu , Jizhou Huang , Yang Zhou , Xuhong Li , Shilei Ji , Haoyi Xiong , Dejing Dou

The goals of the Triple Aim of health care and the goals of P4 medicine outline objectives that require a significant health informatics component. However, the goals do not provide specifications about how all of the new individual patient…

Extensive data processing is becoming commonplace in many fields of science. Distributing data to processing sites and providing methods to share the data with collaborators efficiently has become essential. The Open Science Data Federation…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-18 Fabio Andrijauskas , Derek Weitzel , Frank Wuerthwein

Federated learning is the process of developing machine learning models over datasets distributed across data centers such as hospitals, clinical research labs, and mobile devices while preventing data leakage. This survey examines previous…

Machine Learning · Computer Science 2022-11-22 Madhura Joshi , Ankit Pal , Malaikannan Sankarasubbu

Data and Science has stood out in the generation of results, whether in the projects of the scientific domain or business domain. CERN Project, Scientific Institutes, companies like Walmart, Google, Apple, among others, need data to present…

General Literature · Computer Science 2022-01-19 Rogerio Rossi

Information and data exchange is an important aspect of scientific progress. In computational materials science, a prerequisite for smooth data exchange is standardization, which means using agreed conventions for, e.g., units, zero base…

Nowadays, many scientific areas share the same broad requirements of being able to deal with massive and distributed datasets while, when possible, being integrated with services and applications. In order to solve the growing gap between…

Instrumentation and Methods for Astrophysics · Physics 2011-12-06 M. Brescia , S. Cavuoti , R. D'Abrusco , O. Laurino , G. Longo