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In cryo-electron microscopy, accurate particle localization and classification are imperative. Recent deep learning solutions, though successful, require extensive training data sets. The protracted generation time of physics-based models,…

Machine Learning · Computer Science 2025-02-20 Pavol Harar , Lukas Herrmann , Philipp Grohs , David Haselbach

Even though novel imaging techniques have been successful in studying brain structure and function, the measured biological signals are often contaminated by multiple sources of noise, arising due to e.g. head movements of the individual…

Computer Vision and Pattern Recognition · Computer Science 2025-05-20 Brice Ozenne , Martin Norgaard , Cyril Pernet , Melanie Ganz

We present a data reduction pipeline (DRP) for Keck/NIRSPEC built as an addition to the PypeIt Python package. The DRP is capable of reducing multi-order echelle data taken both before and after the detector upgrade in 2018. As part of…

Exponential increases in scientific experimental data are outstripping the rate of progress in silicon technology. As a result, heterogeneous combinations of architectures and process or device technologies are increasingly important to…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-07-02 Wilkie Olin-Ammentorp , Xingfu Wu , Andrew A. Chien

Deep learning models have provided huge interpretation power for image-like data. Specifically, convolutional neural networks (CNNs) have demonstrated incredible acuity for tasks such as feature extraction or parameter estimation. Here we…

The potential to use neutrinos for nuclear non-proliferation has been heavily debated due to the tension between production abundance and low interaction rate. A newly detected neutrino interaction channel, coherent elastic neutrino-nucleus…

Instrumentation and Detectors · Physics 2025-11-18 Brianna N Ryan , Harold Douglas Pinckney D Pinckney , Michael P Short , Joseph A Formaggio

We present a fully modular and scalable software pipeline for processing electron microscope (EM) images of brain slices into 3D visualization of individual neurons and demonstrate an end-to-end segmentation of a large EM volume using a…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-11-20 Rafael Vescovi , Hanyu Li , Jeffery Kinnison , Murat Keceli , Misha Salim , Narayanan Kasthuri , Thomas D. Uram , Nicola Ferrier

We demonstrate that several techniques based on cross correlation are able to significantly reduce the detection threshold of seismic sources worldwide and to improve the reliability of IDC arrivals by a more accurate estimation of their…

Geophysics · Physics 2012-12-27 Dmitry Bobrov , Ivan Kitov , Lassina Zerbo

Recently, the IceCube Neutrino Observatory has reported a deviation from the single power law in the extragalactic diffuse neutrino flux. A neural network-based event selection of contained and uncontained cascade events from IceCube, in…

High Energy Astrophysical Phenomena · Physics 2025-08-11 Emre Yildizci , Zoë Rechav , Lu Lu

The planned IceCube-Gen2 radio neutrino detector at the South Pole will enhance the detection of cosmic ultra-high-energy neutrinos. It is crucial to utilize the available time until construction to optimize the detector design. A fully…

Instrumentation and Methods for Astrophysics · Physics 2026-03-10 Philipp Pilar , Martin Ravn , Christian Glaser , Niklas Wahlström

We present a convenient, all-in-one framework for the scientific analysis of fully reduced, (integral-field) spectroscopic data. The GIST pipeline (Galaxy IFU Spectroscopy Tool) is entirely written in Python3 and conducts all steps from the…

The detection and cross-section measurement of Coherent Elastic Neutrino-Nucleus Scattering (CE{\nu}NS) are vital for particle physics, astrophysics, and nuclear physics. Therefore, a new CE{\nu}NS detection experiment is proposed in China.…

Instrumentation and Detectors · Physics 2023-07-28 Chenguang Su , Qian Liu , Tianjiao Liang

This paper introduces Sparklen, a statistical learning toolkit for Hawkes processes in Python, designed to bring together efficiency and ease of use. The purpose of this package is to provide the Python community with a complete suite of…

Methodology · Statistics 2025-03-31 Romain Edmond Lacoste

Detailed modeling of processors and high performance cycle-accurate simulators are essential for today's hardware and software design. These problems are challenging enough by themselves and have seen many previous research efforts.…

Hardware Architecture · Computer Science 2011-11-09 Mehrdad Reshadi , Nikil Dutt

Coming high-cadence wide-field optical telescopes will image hundreds of thousands of sources per minute. Besides inspecting the near real-time data streams for transient and variability events, the accumulated data archive is a wealthy…

Instrumentation and Methods for Astrophysics · Physics 2018-03-20 Bart Scheers , Steven Bloemen , Hannes Mühleisen , Pim Schellart , Arjen van Elteren , Martin Kersten , Paul J. Groot

We developed a pulsar search pipeline based on PRESTO (PulsaR Exploration and Search Toolkit). This pipeline simply runs dedispersion, FFT (Fast Fourier Transformation), and acceleration search in process-level parallel to shorten the…

Instrumentation and Methods for Astrophysics · Physics 2020-07-08 Qiuyu Yu , Zhichen Pan , Lei Qian , Shen Wang , Youling Yue , Menglin Huang , Qiaoli Hao , Shanping You , Bo Peng , Yan Zhu , Lei Zhang , Zhijie Liu

The IceCube Neutrino Observatory at the South Pole has measured the diffuse astrophysical neutrino flux up to ~PeV energies and is starting to identify first point source candidates. The next generation facility, IceCube-Gen2, aims at…

High Energy Astrophysical Phenomena · Physics 2021-07-20 Steffen Hallmann , Brian Clark , Christian Glaser , Daniel Smith

The European Spallation Source (ESS), presently well on its way to completion, will soon provide the most intense neutron beams for multi-disciplinary science. Fortuitously, it will also generate the largest pulsed neutrino flux suitable…

Spiking reservoir computing provides an energy-efficient approach to temporal processing, but reliably tuning reservoirs to operate at the edge-of-chaos is challenging due to experimental uncertainty. This work bridges abstract notions of…

Machine Learning · Computer Science 2026-04-09 Ruggero Freddi , Nicolas Seseri , Diana Nigrisoli , Alessio Basti
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