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Finding a suitable density function is essential for density-based clustering algorithms such as DBSCAN and DPC. A naive density corresponding to the indicator function of a unit $d$-dimensional Euclidean ball is commonly used in these…

Machine Learning · Computer Science 2021-10-15 Chao Zheng , Yingjie Chen , Chong Chen , Jianqiang Huang , Xian-Sheng Hua

We present a new algorithm for the widely used density-based clustering method DBscan. Our algorithm computes the DBscan-clustering in $O(n\log n)$ time in $\mathbb{R}^2$, irrespective of the scale parameter $\varepsilon$ (and assuming the…

Computational Geometry · Computer Science 2017-03-01 Mark de Berg , Ade Gunawan , Marcel Roeloffzen

K-means plays a vital role in data mining and is the simplest and most widely used algorithm under the Euclidean Minimum Sum-of-Squares Clustering (MSSC) model. However, its performance drastically drops when applied to vast amounts of…

Machine Learning · Computer Science 2023-11-27 Rustam Mussabayev , Nenad Mladenovic , Bassem Jarboui , Ravil Mussabayev

The capability of classifying and clustering a desired set of data is an essential part of building knowledge from data. However, as the size and dimensionality of input data increases, the run-time for such clustering algorithms is…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-25 Hadi Mardani Kamali

Clustering techniques are very attractive for extracting and identifying patterns in datasets. However, their application to very large spatial datasets presents numerous challenges such as high-dimensionality data, heterogeneity, and high…

Databases · Computer Science 2018-02-27 Malika Bendechache , Nhien-An Le-Khac , M-Tahar Kechadi

We propose a fast and dynamic algorithm for Density-Based Spatial Clustering of Applications with Noise (DBSCAN) that efficiently supports online updates. Traditional DBSCAN algorithms, designed for batch processing, become computationally…

Machine Learning · Computer Science 2025-03-12 Seiyun Shin , Ilan Shomorony , Peter Macgregor

Density-based clustering is the task of discovering high-density regions of entities (clusters) that are separated from each other by contiguous regions of low-density. DBSCAN is, arguably, the most popular density-based clustering…

Machine Learning · Computer Science 2018-11-20 Stiphen Chowdhury , Renato Cordeiro de Amorim

DBSCAN is a well-known density-based clustering algorithm to discover arbitrary shape clusters. While conceptually simple in serial, the algorithm is challenging to efficiently parallelize on manycore GPU architectures. Common pitfalls,…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-06-30 Andrey Prokopenko , Damien Lebrun-Grandie , Daniel Arndt

We present an accelerated algorithm for hierarchical density based clustering. Our new algorithm improves upon HDBSCAN*, which itself provided a significant qualitative improvement over the popular DBSCAN algorithm. The accelerated HDBSCAN*…

Machine Learning · Statistics 2018-12-20 Leland McInnes , John Healy

Density-based clustering algorithms are widely used for discovering clusters in pattern recognition and machine learning since they can deal with non-hyperspherical clusters and are robustness to handle outliers. However, the runtime of…

Machine Learning · Computer Science 2022-07-07 Difei Cheng , Ruihang Xu , Bo Zhang , Ruinan Jin

Deep learning models have become widely adopted in various domains, but their performance heavily relies on a vast amount of data. Datasets often contain a large number of irrelevant or redundant samples, which can lead to computational…

Audio and Speech Processing · Electrical Eng. & Systems 2023-09-22 Boris Bergsma , Marta Brzezinska , Oleg V. Yazyev , Milos Cernak

We consider a network of binary-valued sensors with a fusion center. The fusion center has to perform K-means clustering on the binary data transmitted by the sensors. In order to reduce the amount of data transmitted within the network,…

Information Theory · Computer Science 2018-01-18 Elsa Dupraz

Atom probe tomography is commonly used to study solute clustering and precipitation in materials. However, standard techniques, such as the density based spatial clustering applications with noise (DBSCAN) perform poorly with respect to…

Materials Science · Physics 2025-09-05 R S. Stroud , A. Al-Saffar , M. Carter , M P. Moody , S. Pedrazzini , M R. Wenman

SUMMARY Geophysical imaging using the inversion procedure is a powerful tool for the exploration of the Earth's subsurface. However, the interpretation of inverted images can sometimes be difficult, due to the inherent limitations of…

DBSCAN is an algorithm that performs clustering in the presence of noise. In this paper, we provide two constructions that allow DBSCAN to be implemented neuromorphically, using spiking neural networks. The first construction is termed…

Neural and Evolutionary Computing · Computer Science 2024-09-24 Charles P. Rizzo , James S. Plank

We present sDBSCAN, a scalable density-based clustering algorithm in high dimensions with cosine distance. Utilizing the neighborhood-preserving property of random projections, sDBSCAN can quickly identify core points and their…

Machine Learning · Computer Science 2025-05-20 Haochuan Xu , Ninh Pham

We present an unsupervised data processing workflow that is specifically designed to obtain a fast conformational clustering of long molecular dynamics simulation trajectories. In this approach we combine two dimensionality reduction…

Chemical Physics · Physics 2023-08-09 Simon Hunkler , Kay Diederichs , Oleksandra Kukharenko , Christine Peter

Clustering large, mixed data is a central problem in data mining. Many approaches adopt the idea of k-means, and hence are sensitive to initialisation, detect only spherical clusters, and require a priori the unknown number of clusters. We…

Machine Learning · Statistics 2020-11-13 Joshua Tobin , Mimi Zhang

Common clustering algorithms require multiple scans of all the data to achieve convergence, and this is prohibitive when large databases, with data arriving in streams, must be processed. Some algorithms to extend the popular K-means method…

Applications · Statistics 2017-12-22 Giacomo Aletti , Alessandra Micheletti

Many scientific problems involve data that is embedded in a space with periodic boundary conditions. This can for instance be related to an inherent cyclic or rotational symmetry in the data or a spatially extended periodicity. When…

Machine Learning · Computer Science 2025-10-08 Xander M. de Wit , Alessandro Gabbana