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Predicting phenotypes from gene expression data is a crucial task in biomedical research, enabling insights into disease mechanisms, drug responses, and personalized medicine. Traditional machine learning and deep learning rely on…

Machine Learning · Computer Science 2025-09-18 Kevin Dradjat , Massinissa Hamidi , Pierre Bartet , Blaise Hanczar

Accurate segmentation of retinal fluids in 3D Optical Coherence Tomography images is key for diagnosis and personalized treatment of eye diseases. While deep learning has been successful at this task, trained supervised models often fail…

Computer Vision and Pattern Recognition · Computer Science 2022-08-05 Alvaro Gomariz , Huanxiang Lu , Yun Yvonna Li , Thomas Albrecht , Andreas Maunz , Fethallah Benmansour , Alessandra M. Valcarcel , Jennifer Luu , Daniela Ferrara , Orcun Goksel

Data fusion enables powerful and generalizable analyses across multiple sources. However, different data collection capacities across different sources lead to blockwise missingness (BM), which poses challenges in practice. Meanwhile, the…

Methodology · Statistics 2025-12-09 Yiming Li , Ying Wei , Molei Liu

Supervised deep learning algorithms have enabled significant performance gains in medical image classification tasks. But these methods rely on large labeled datasets that require resource-intensive expert annotation. Semi-supervised…

Semi-supervised learning (SSL) tackles the label missing problem by enabling the effective usage of unlabeled data. While existing SSL methods focus on the traditional setting, a practical and challenging scenario called label Missing Not…

Machine Learning · Computer Science 2023-08-21 Yue Duan , Zhen Zhao , Lei Qi , Luping Zhou , Lei Wang , Yinghuan Shi

The ever-increasing size of modern data sets combined with the difficulty of obtaining label information has made semi-supervised learning one of the problems of significant practical importance in modern data analysis. We revisit the…

Machine Learning · Computer Science 2014-11-06 Diederik P. Kingma , Danilo J. Rezende , Shakir Mohamed , Max Welling

Recent contrastive methods show significant improvement in self-supervised learning in several domains. In particular, contrastive methods are most effective where data augmentation can be easily constructed e.g. in computer vision.…

Machine Learning · Computer Science 2021-12-09 Konstantinos Kallidromitis , Denis Gudovskiy , Kazuki Kozuka , Iku Ohama , Luca Rigazio

Existing unsupervised domain adaptation methods based on adversarial learning have achieved good performance in several medical imaging tasks. However, these methods focus only on global distribution adaptation and ignore distribution…

Computer Vision and Pattern Recognition · Computer Science 2022-07-11 Wei Feng , Lin Wang , Lie Ju , Xin Zhao , Xin Wang , Xiaoyu Shi , Zongyuan Ge

The key distinguishing property of a Bayesian approach is marginalization, rather than using a single setting of weights. Bayesian marginalization can particularly improve the accuracy and calibration of modern deep neural networks, which…

Machine Learning · Computer Science 2022-03-31 Andrew Gordon Wilson , Pavel Izmailov

Training neural networks using limited annotations is an important problem in the medical domain. Deep Neural Networks (DNNs) typically require large, annotated datasets to achieve acceptable performance which, in the medical domain, are…

Computer Vision and Pattern Recognition · Computer Science 2024-10-28 Bethany H. Thompson , Gaetano Di Caterina , Jeremy P. Voisey

The performance of supervised deep learning methods for medical image segmentation is often limited by the scarcity of labeled data. As a promising research direction, semi-supervised learning addresses this dilemma by leveraging unlabeled…

Image and Video Processing · Electrical Eng. & Systems 2024-05-13 Zihang Liu , Chunhui Zhao

The amount of manually labeled data is limited in medical applications, so semi-supervised learning and automatic labeling strategies can be an asset for training deep neural networks. However, the quality of the automatically generated…

Machine Learning · Computer Science 2022-03-04 Wenhui Cui , Haleh Akrami , Anand A. Joshi , Richard M. Leahy

Consistency regularization-based methods are prevalent in semi-supervised learning (SSL) algorithms due to their exceptional performance. However, they mainly depend on domain-specific data augmentations, which are not usable in domains…

Machine Learning · Computer Science 2023-09-29 Matin Moezzi

Acquisition of training data for the standard semantic segmentation is expensive if requiring that each pixel is labeled. Yet, current methods significantly deteriorate in weakly supervised settings, e.g. where a fraction of pixels is…

Computer Vision and Pattern Recognition · Computer Science 2021-10-13 Dmitrii Marin , Yuri Boykov

Minimizing prediction uncertainty on unlabeled data is a key factor to achieve good performance in semi-supervised learning (SSL). The prediction uncertainty is typically expressed as the \emph{entropy} computed by the transformed…

Machine Learning · Computer Science 2021-12-16 Jing Li , Yuangang Pan , Ivor W. Tsang

Semi-supervised object detection has recently achieved substantial progress. As a mainstream solution, the self-labeling-based methods train the detector on both labeled data and unlabeled data with pseudo labels predicted by the detector…

Computer Vision and Pattern Recognition · Computer Science 2022-04-19 Chengcheng Ma , Xingjia Pan , Qixiang Ye , Fan Tang , Weiming Dong , Changsheng Xu

Anomaly detection (AD), separating anomalies from normal data, has many applications across domains, from security to healthcare. While most previous works were shown to be effective for cases with fully or partially labeled data, that…

Machine Learning · Computer Science 2022-08-08 Jinsung Yoon , Kihyuk Sohn , Chun-Liang Li , Sercan O. Arik , Chen-Yu Lee , Tomas Pfister

Dataset pruning reduces the storage and training costs of deep learning by selecting an informative subset from a large dataset. However, most existing pruning methods require fully labeled data, which limits their applicability in…

Machine Learning · Computer Science 2026-05-25 Yeseul Cho , Baekrok Shin , Changmin Kang , Chulhee Yun

Due to abundance of data from multiple modalities, cross-modal retrieval tasks with image-text, audio-image, etc. are gaining increasing importance. Of the different approaches proposed, supervised methods usually give significant…

Computer Vision and Pattern Recognition · Computer Science 2020-01-03 Devraj Mandal , Pramod Rao , Soma Biswas

Semi-Supervised Learning (SSL) aims to learn a model using a tiny labeled set and massive amounts of unlabeled data. To better exploit the unlabeled data the latest SSL methods use pseudo-labels predicted from a single discriminative…

Computer Vision and Pattern Recognition · Computer Science 2024-02-19 Zhongying Deng , Rihuan Ke , Carola-Bibiane Schonlieb , Angelica I Aviles-Rivero
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