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Biological time can be measured in two ways: in generations and in physical (chronological) time. When generations overlap, these two notions diverge, which impedes our ability to relate mathematical models to real populations. In this…

Populations and Evolution · Quantitative Biology 2026-04-08 Kaan Öcal , Michael P. H. Stumpf

We study the problem of reaching agreement in a synchronous distributed system by $n$ autonomous parties, when the communication links from/to faulty parties can omit messages. The faulty parties are selected and controlled by an adaptive,…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-27 Mohammad T. Hajiaghayi , Dariusz R. Kowalski , Jan Olkowski

In this note, following suggestions by Tao, we extend the randomized algorithm for linear equations over prime fields by Raghavendra to a randomized algorithm for linear equations over the reals. We also show that the algorithm can be…

Numerical Analysis · Mathematics 2012-09-19 Joerg Fliege

Consider the following asynchronous, opportunistic communication model over a graph $G$: in each round, one edge is activated uniformly and independently at random and (only) its two endpoints can exchange messages and perform local…

The sliding square model is a widely used abstraction for studying self-reconfigurable robotic systems, where modules are square-shaped robots that move by sliding or rotating over one another. In this paper, we propose a novel distributed…

Computational Geometry · Computer Science 2025-09-15 Irina Kostitsyna , David Liedtke , Christian Scheideler

Neighborhood graphs are gaining popularity as a concise data representation in machine learning. However, naive graph construction by pairwise distance calculation takes $O(n^2)$ runtime for $n$ data points and this is prohibitively slow…

Data Structures and Algorithms · Computer Science 2009-04-22 Takeaki Uno , Masashi Sugiyama , Koji Tsuda

Real-time systems increasingly use multicore processors in order to satisfy thermal, power, and computational requirements. To exploit the architectural parallelism offered by the multicore processors, parallel task models, scheduling…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-01-28 Niklas Ueter , Mario Günzel , Jian-Jia Chen

Population protocols are a model of distributed computation intended for the study of networks of independent computing agents with dynamic communication structure. Each agent has a finite number of states, and communication opportunities…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-09-02 Michael Raskin

The population protocol model describes a network of anonymous agents that interact asynchronously in pairs chosen at random. Each agent starts in the same initial state $s$. We introduce the *dynamic size counting* problem: approximately…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-02-28 David Doty , Mahsa Eftekhari

Matrix clocks are a generalization of the notion of vector clocks that allows the local representation of causal precedence to reach into an asynchronous distributed computation's past with depth $x$, where $x\ge 1$ is an integer.…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 L. M. A. Drummond , V. C. Barbosa

We introduce the first index that can be built in $o(n)$ time for a text of length $n$, and can also be queried in $o(q)$ time for a pattern of length $q$. On an alphabet of size $\sigma$, our index uses $O(n\sqrt{\log n\log\sigma})$ bits,…

Data Structures and Algorithms · Computer Science 2019-07-16 J. Ian Munro , Gonzalo Navarro , Yakov Nekrich

We present an algorithm that, with high probability, generates a random spanning tree from an edge-weighted undirected graph in $\tilde{O}(n^{4/3}m^{1/2}+n^{2})$ time (The $\tilde{O}(\cdot)$ notation hides $\operatorname{polylog}(n)$…

Data Structures and Algorithms · Computer Science 2017-06-22 David Durfee , Rasmus Kyng , John Peebles , Anup B. Rao , Sushant Sachdeva

Change point detection plays a fundamental role in many real-world applications, where the goal is to analyze and monitor the behaviour of a data stream. In this paper, we study change detection in binary streams. To this end, we use a…

Machine Learning · Computer Science 2023-01-24 Nikolaj Tatti

Simulating a cellular automaton (CA) for t time-steps into the future requires t^2 serial computation steps or t parallel ones. However, certain CAs based on an Abelian group, such as addition mod 2, are termed ``linear'' because they obey…

adap-org · Physics 2009-10-30 Cristopher Moore

We revisit the classic border tree data structure [Gu, Farach, Beigel, SODA 1994] that answers the following prefix-suffix queries on a string $T$ of length $n$ over an integer alphabet $\Sigma=[0,\sigma)$: for any $i,j \in [0,n)$ return…

Data Structures and Algorithms · Computer Science 2024-11-07 Solon P. Pissis

We propose a multi party quantum clock synchronization protocol that makes optimal use of the maximal multipartite entanglement of GHZ-type states. To realize the protocol, different versions of maximally entangled eigenstates of collective…

Quantum Physics · Physics 2015-06-04 Changliang Ren , Holger F. Hofmann

This paper presents a distributed hybrid algorithm that synchronizes the time and rate of a set of clocks connected over a network. Clock measurements of the nodes are given at aperiodic time instants and the controller at each node uses…

Optimization and Control · Mathematics 2022-07-11 Marcello Guarro , Ricardo G. Sanfelice

This paper shows how to compute, for probabilistic hybrid systems, the clock approximation and linear phase-portrait approximation that have been proposed for non probabilistic processes by Henzinger et al. The techniques permit to define a…

Logic in Computer Science · Computer Science 2011-07-07 Joseph Assouramou , Josée Desharnais

We study the problem of edge partitioning, where the goal is to partition the edge set of a graph into several parts. The replication factor of a vertex $v$ is the number of parts that contain edges incident to $v$. The goal is to minimize…

Discrete Mathematics · Computer Science 2026-05-08 Alexander Yakunin , Andrey Kupavskii , Alexander Sushin , Stanislav Moiseev

We show how to construct an overlay network of constant degree and diameter $O(\log n)$ in time $O(\log n)$ starting from an arbitrary weakly connected graph. We assume a synchronous communication network in which nodes can send messages to…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-07-28 Thorsten Götte , Kristian Hinnenthal , Christian Scheideler , Julian Werthmann