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Optimal Morse matchings reveal essential structures of cell complexes which lead to powerful tools to study discrete geometrical objects, in particular discrete 3-manifolds. However, such matchings are known to be NP-hard to compute on…

Computational Geometry · Computer Science 2018-10-24 Benjamin A. Burton , Thomas Lewiner , João Paixão , Jonathan Spreer

In this paper, we develop a method to compute the Morse homology of a manifold when descending manifolds and ascending manifolds intersect cleanly, but not necessarily transversely. While obstruction bundle gluing defined by Hutchings and…

Symplectic Geometry · Mathematics 2024-09-19 Erkao Bao , Ke Zhu

This paper introduces decorated merge trees (DMTs) as a novel invariant for persistent spaces. DMTs combine both $\pi_0$ and $H_n$ information into a single data structure that distinguishes filtrations that merge trees and persistent…

Algebraic Topology · Mathematics 2021-07-29 Justin Curry , Haibin Hang , Washington Mio , Tom Needham , Osman Berat Okutan

This paper is a survey of our work based on the stratified Morse theory of Goresky and MacPherson. First we discuss the Morse theory of Euclidean space stratified by an arrangement. This is used to show that the complement of a complex…

Algebraic Geometry · Mathematics 2007-05-23 Daniel C. Cohen , Peter Orlik

This paper proposes a new framework and algorithms to address the problem of diffeomorphic registration on a general class of geometric objects that can be described as discrete distributions of local direction vectors. It builds on both…

Optimization and Control · Mathematics 2018-02-15 Hsi-Wei Hsieh , Nicolas Charon

Bouc (1992) first studied the topological properties of $M_n$, the matching complex of the complete graph of order $n$, in connection with Brown complexes and Quillen complexes. Bj\"{o}rner et al. (1994) showed that $M_n$ is homotopically…

Combinatorics · Mathematics 2024-11-06 Anupam Mondal , Sajal Mukherjee , Kuldeep Saha

Lossy compression, widely used by scientists to reduce data from simulations, experiments, and observations, can distort features of interest even under bounded error. Such distortions may compromise downstream analyses and lead to…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-06 Yuxiao Li , Mingze Xia , Xin Liang , Bei Wang , Robert Underwood , Sheng Di , Hemant Sharma , Dishant Beniwal , Franck Cappello , Hanqi Guo

This paper presents a novel meta algorithm, Partition-Merge (PM), which takes existing centralized algorithms for graph computation and makes them distributed and faster. In a nutshell, PM divides the graph into small subgraphs using our…

Data Structures and Algorithms · Computer Science 2013-09-25 Vincent Blondel , Kyomin Jung , Pushmeet Kohli , Devavrat Shah

The focus of this article is to develop computationally efficient mathematical morphology operators on hypergraphs. To this aim we consider lattice structures on hypergraphs on which we build morphological operators. We develop a pair of…

Discrete Mathematics · Computer Science 2014-02-19 V. Bino Sebastian , A Unnikrishnan , Kannan Balakrishnan , P. B Ramkumar

This paper brings together three distinct theories with the goal of quantifying shape textures with complex morphologies. Distance fields are central objects in shape representation, while topological data analysis uses algebraic topology…

Algebraic Topology · Mathematics 2023-07-04 Anna Song , Ka Man Yim , Anthea Monod

We study dynamic graph algorithms in the Massively Parallel Computation model, which was inspired by practical data processing systems. Our goal is to provide algorithms that can efficiently handle large batches of edge insertions and…

Data Structures and Algorithms · Computer Science 2021-01-12 Krzysztof Nowicki , Krzysztof Onak

The interaction between discrete and continuous mathematics lies at the heart of many fundamental problems in applied mathematics and computational sciences. In this paper we discuss the problem of discretizing vector-valued functions…

Numerical Analysis · Mathematics 2020-05-29 Paweł Dłotko , Thomas Wanner

Multiplication of a sparse matrix with another (dense or sparse) matrix is a fundamental operation that captures the computational patterns of many data science applications, including but not limited to graph algorithms, sparsely connected…

Numerical Analysis · Mathematics 2025-08-07 Aydın Buluç

This research explores a novel paradigm for preserving topological segmentations in existing error-bounded lossy compressors. Today's lossy compressors rarely consider preserving topologies such as Morse-Smale complexes, and the…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-07-08 Yuxiao Li , Xin Liang , Bei Wang , Yongfeng Qiu , Lin Yan , Hanqi Guo

Persistent homology is a popular tool in Topological Data Analysis. It provides numerical characteristics of data sets which reflect global geometric properties. In order to be useful in practice, for example for feature generation in…

Computational Geometry · Computer Science 2020-02-17 Boris Goldfarb

Persistent (co)homology is a central construction in topological data analysis, where it is used to quantify prominence of features in data to produce stable descriptors suitable for downstream analysis. Persistence is challenging to…

Computational Geometry · Computer Science 2024-10-23 Arnur Nigmetov , Dmitriy Morozov

This article introduces an algorithm to compute the persistent homology of a filtered complex with various coefficient fields in a single matrix reduction. The algorithm is output-sensitive in the total number of distinct persistent…

Computational Geometry · Computer Science 2020-01-10 Jean-Daniel Boissonnat , Clément Maria

Geometric discretisation draws analogies between discrete objects and operations on a complex with continuum ones on a manifold. We generalise the theory to the cubic case and incorporate metric, by adding volume factors to our discrete…

High Energy Physics - Theory · Physics 2007-05-23 Samik Sen

Generalized sparse matrix-matrix multiplication is a key primitive for many high performance graph algorithms as well as some linear solvers such as multigrid. We present the first parallel algorithms that achieve increasing speedups for an…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-08-09 Aydın Buluç , John R. Gilbert

We develop a discrete Morse theory for open simplicial complexes $K=X\setminus T$ where $X$ is a simplicial complex and $T$ a subcomplex of $X$. A discrete Morse function $f$ on $K$ gives rise to a discrete Morse function on the order…

Algebraic Topology · Mathematics 2026-02-23 Kevin P. Knudson , Nicholas A. Scoville