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The motivation for this paper is to apply Bayesian structure learning using Model Averaging in large-scale networks. Currently, Bayesian model averaging algorithm is applicable to networks with only tens of variables, restrained by its…

Machine Learning · Computer Science 2012-10-19 Yang Lu , Mengying Wang , Menglu Li , Qili Zhu , Bo Yuan

Network models are used to study interconnected systems across many physical, biological, and social disciplines. Such models often assume a particular network-generating mechanism, which when fit to data produces estimates of…

Social and Information Networks · Computer Science 2022-01-17 Ryan E. Langendorf , Matthew G. Burgess

Spatiotemporal datasets, which consist of spatially-referenced time series, are ubiquitous in diverse applications, such as air pollution monitoring, disease tracking, and cloud-demand forecasting. As the scale of modern datasets increases,…

Machine Learning · Computer Science 2024-11-28 Feras Saad , Jacob Burnim , Colin Carroll , Brian Patton , Urs Köster , Rif A. Saurous , Matthew Hoffman

An information theoretic approach inspired by quantum statistical mechanics was recently proposed as a means to optimize network models and to assess their likelihood against synthetic and real-world networks. Importantly, this method does…

Statistical Mechanics · Physics 2018-09-12 Carlo Nicolini , Vladimir Vlasov , Angelo Bifone

The application of the network approach to the urban case poses several questions in terms of how to deal with metric distances, what kind of graph representation to use, what kind of measures to investigate, how to deepen the correlation…

Other Condensed Matter · Physics 2007-05-23 Sergio Porta , Paolo Crucitti , Vito Latora

The spread of non-indigenous species (NIS) through the global shipping network (GSN) has enormous ecological and economic cost throughout the world. Previous attempts at quantifying NIS invasions have mostly taken "bottom-up" approaches…

Social and Information Networks · Computer Science 2014-01-22 J Xu , TL Wickramarathne , EK Grey , K Steinhaeuser , R Keller , J Drake , N Chawla , DM Lodge

In this work, we propose the Sparse Multi-Family Deep Scattering Network (SMF-DSN), a novel architecture exploiting the interpretability of the Deep Scattering Network (DSN) and improving its expressive power. The DSN extracts salient and…

Machine Learning · Statistics 2020-12-15 Romain Cosentino , Randall Balestriero

Graphical models are widely used to study biological networks. Interventions on network nodes are an important feature of many experimental designs for the study of biological networks. In this paper we put forward a causal variant of…

Methodology · Statistics 2015-06-17 Simon E. F. Spencer , Steven M. Hill , Sach Mukherjee

Low-dimensional probability models for local distribution functions in a Bayesian network include decision trees, decision graphs, and causal independence models. We describe a new probability model for discrete Bayesian networks, which we…

Machine Learning · Statistics 2019-10-23 David Heckerman , Chris Meek

An emerging area of research is the study of macroscale migration patterns as a network of nodes that represent places (e.g., countries, cities, and rural areas) and edges that encode migration ties that connect those places. In this…

Social and Information Networks · Computer Science 2020-05-28 Valentin Danchev , Mason A. Porter

A Bayesian network is a widely used probabilistic graphical model with applications in knowledge discovery and prediction. Learning a Bayesian network (BN) from data can be cast as an optimization problem using the well-known…

Artificial Intelligence · Computer Science 2018-11-14 Zhenyu A. Liao , Charupriya Sharma , James Cussens , Peter van Beek

In a graph, a community may be loosely defined as a group of nodes that are more closely connected to one another than to the rest of the graph. While there are a variety of metrics that can be used to specify the quality of a given…

Social and Information Networks · Computer Science 2014-04-24 Christine Klymko , David Gleich , Tamara G. Kolda

A Bayesian network is a widely used probabilistic graphical model with applications in knowledge discovery and prediction. Learning a Bayesian network (BN) from data can be cast as an optimization problem using the well-known…

Artificial Intelligence · Computer Science 2020-09-01 Zhenyu A. Liao , Charupriya Sharma , James Cussens , Peter van Beek

Networks are representations of complex underlying social processes. However, the same given network may be more suitable to model one behavior of individuals than another. In many cases, aggregate population models may be more effective…

Social and Information Networks · Computer Science 2017-08-22 Ivan Brugere , Chris Kanich , Tanya Y. Berger-Wolf

Research data sets are growing to unprecedented sizes and network modeling is commonly used to extract complex relationships in diverse domains, such as genetic interactions involved in disease, logistics, and social communities. As the…

Social and Information Networks · Computer Science 2024-05-03 Sharlee Climer , Kenneth Smith , Wei Yang , Lisa de las Fuentes , Victor G. Dávila-Román , C. Charles Gu

Social networks have been widely studied over the last century from multiple disciplines to understand societal issues such as inequality in employment rates, managerial performance, and epidemic spread. Today, these and many more issues…

Social and Information Networks · Computer Science 2023-06-21 Lisette Espín-Noboa , Tiago Peixoto , Fariba Karimi

A common network inference problem, arising from real-world data constraints, is how to infer a dynamic network from its time-aggregated adjacency matrix and time-varying marginals (i.e., row and column sums). Prior approaches to this…

Machine Learning · Statistics 2024-08-21 Serina Chang , Frederic Koehler , Zhaonan Qu , Jure Leskovec , Johan Ugander

Network structures underlie the dynamics of many complex phenomena, from gene regulation and foodwebs to power grids and social media. Yet, as they often cannot be observed directly, their connectivities must be inferred from observations…

Machine Learning · Computer Science 2023-11-02 Thomas Gaskin , Grigorios A. Pavliotis , Mark Girolami

Machine learning has the potential to revolutionize the field of molecular simulation through the development of efficient and accurate models of interatomic interactions. In particular, neural network models can describe interactions at…

Chemical Physics · Physics 2022-04-06 Ang Gao , Richard C. Remsing

Network-based models of epidemic spread have become increasingly popular in recent decades. Despite a rich foundation of such models, few low-dimensional systems for modeling SIS-type diseases have been proposed that manage to capture the…

Dynamical Systems · Mathematics 2021-01-01 Carl Corcoran , Alan Hastings