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The problem of the reconstruction of the large scale density and velocity fields from peculiar velocities surveys is addressed here within a Bayesian framework by means of Hamiltonian Monte Carlo (HMC) sampling. The HAmiltonian Monte carlo…

Cosmology and Nongalactic Astrophysics · Physics 2022-06-01 Aurélien Valade , Yehuda Hoffman , Noam I Libeskind , Romain Graziani

This thesis is concerned with two topics in Hamiltonian lattice gauge theory: improvement and the application of analytic techniques. On the topic of improvement, we develop a direct method for improving lattice Hamiltonians for gluons, in…

High Energy Physics - Lattice · Physics 2007-05-23 Jesse Carlsson

Markov chain Monte Carlo methods are a powerful tool for sampling equilibrium configurations in complex systems. One problem these methods often face is slow convergence over large energy barriers. In this work, we propose a novel method…

Computational Physics · Physics 2024-05-29 Luigi Sbailò , Manuel Dibak , Frank Noé

Monte Carlo (MC) simulations are essential computational approaches with widespread use throughout all areas of science. We present a method for accelerating lattice MC simulations using fully connected and convolutional artificial neural…

Strongly Correlated Electrons · Physics 2019-07-31 Shaozhi Li , Philip M. Dee , Ehsan Khatami , Steven Johnston

Markov chain Monte Carlo (MCMC) methods are a powerful but computationally expensive way of performing non-parametric Bayesian inference. MCMC proposals which utilise gradients, such as Hamiltonian Monte Carlo (HMC), can better explore the…

Computation · Statistics 2026-01-30 Andrew Millard , Joshua Murphy , Daniel Frisch , Simon Maskell

We present a Hamiltonian Monte Carlo algorithm to sample from multivariate Gaussian distributions in which the target space is constrained by linear and quadratic inequalities or products thereof. The Hamiltonian equations of motion can be…

Computation · Statistics 2013-06-06 Ari Pakman , Liam Paninski

Hamiltonian Monte Carlo (HMC) samples efficiently from high-dimensional posterior distributions with proposed parameter draws obtained by iterating on a discretized version of the Hamiltonian dynamics. The iterations make HMC…

Computation · Statistics 2019-05-03 Khue-Dung Dang , Matias Quiroz , Robert Kohn , Minh-Ngoc Tran , Mattias Villani

Simulations of QCD suffer from severe critical slowing down towards the continuum limit. This problem is known to be prominent in the topological charge, however, all observables are affected to various degree by these slow modes in the…

High Energy Physics - Lattice · Physics 2011-07-15 Stefan Schaefer , Francesco Virotta

The extreme anisotropic limit of Euclidean SU(3) lattice gauge theory is examined to extract the Hamiltonian limit, using standard path integral Monte Carlo (PIMC) methods. We examine the mean plaquette and string tension and compare them…

High Energy Physics - Lattice · Physics 2010-03-04 T. M. R. Byrnes , M. Loan , C. J. Hamer , Frederic D. R. Bonnet , Derek B. Leinweber , Anthony G. Williams , James M. Zanotti

The idea of blocking in configuration space has played an important role in the development of the RG ideas. However, despite being half a century old and having had a huge intellectual impact, generic numerical methods to perform blocking…

High Energy Physics - Lattice · Physics 2016-11-22 Yannick Meurice , Yuzhi Liu , Judah Unmuth-Yockey , Li-Ping Yang , Haiyuan Zou

When properly tuned, Hamiltonian Monte Carlo scales to some of the most challenging high-dimensional problems at the frontiers of applied statistics, but when that tuning is suboptimal the performance leaves much to be desired. In this…

Methodology · Statistics 2016-04-05 Michael Betancourt

Recent lattice measurements of the topological susceptibility of SU(2) gauge theory using improved cooling and inverse-blocking are in disagreement. We use the overlap method, which probes the fermionic sector of the theory directly, to…

High Energy Physics - Lattice · Physics 2009-10-30 Rajamani Narayanan , Robert L. Singleton

Improved staggered fermion formulations are a popular choice for lattice QCD calculations. Historically, the algorithm used for such calculations has been the inexact R algorithm, which has systematic errors that only vanish as the square…

High Energy Physics - Lattice · Physics 2008-11-26 M. A. Clark , A. D. Kennedy

Hamiltonian Monte Carlo (HMC) algorithms are among the most widely used sampling methods in high dimensional settings, yet their convergence properties are poorly understood in divergences that quantify relative density mismatch, such as…

Machine Learning · Statistics 2026-01-15 Nawaf Bou-Rabee , Siddharth Mitra , Andre Wibisono

Hamiltonian Monte Carlo is typically based on the assumption of an underlying canonical symplectic structure. Numerical integrators designed for the canonical structure are incompatible with motion generated by non-canonical dynamics. These…

Machine Learning · Statistics 2020-08-20 James A. Brofos , Roy R. Lederman

In this paper we address the widely-experienced difficulty in tuning Hamiltonian-based Monte Carlo samplers. We develop an algorithm that allows for the adaptation of Hamiltonian and Riemann manifold Hamiltonian Monte Carlo samplers using…

Computation · Statistics 2013-02-26 ziyu wang , Shakir Mohamed , Nando de Freitas

We present results for lattice QCD in the limit of infinite gauge coupling on a discrete spatial but continuous Euclidean time lattice. A worm type Monte Carlo algorithm is applied in order to sample two-point functions which gives access…

High Energy Physics - Lattice · Physics 2018-11-06 Marc Klegrewe , Wolfgang Unger

We consider recent progress in algorithms for generating gauge field configurations that include the dynamical effects of light fermions. We survey what has been achieved in recent state-of-the-art computations, and examine the trade-offs…

High Energy Physics - Lattice · Physics 2009-11-10 A. D. Kennedy

For field theories with a topological charge Q, it is often of interest to measure the topological susceptibility chi_t = ( < Q^2 > - < Q >^2 ) / V. If we manage to perform a Monte Carlo simulation where Q changes frequently, chi_t can be…

The predominant method for generating Lattice QCD configurations is Hybrid Monte Carlo (HMC). In order to speed up this generation, a wide range of preconditioning techniques that modify the lattice action have been devised. This work…

High Energy Physics - Lattice · Physics 2017-02-02 Taylor Haar , Waseem Kamleh , James Zanotti , Yoshfumi Nakamura