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The spread of diseases has been studied for many years, but it receives a particular focus recently due to the outbreak and spread of COVID-19. Studies show that the spread of COVID-19 can be characterized by the…

Machine Learning · Computer Science 2022-04-12 Xiaoxu Zhong , Yukun Ye

Graph neural networks (GNNs), especially dynamic GNNs, have become a research hotspot in spatio-temporal forecasting problems. While many dynamic graph construction methods have been developed, relatively few of them explore the causal…

Machine Learning · Computer Science 2023-05-18 Guojun Liang , Prayag Tiwari , Sławomir Nowaczyk , Stefan Byttner , Fernando Alonso-Fernandez

The outbreaks of Coronavirus Disease 2019 (COVID-19) have impacted the world significantly. Modeling the trend of infection and real-time forecasting of cases can help decision making and control of the disease spread. However, data-driven…

Populations and Evolution · Quantitative Biology 2020-09-18 Zhijian Li , Yunling Zheng , Jack Xin , Guofa Zhou

Modeling epidemic spread is critical for informing policy decisions aimed at mitigation. Accordingly, in this work we present a new data-driven method based on Gaussian process regression (GPR) to model epidemic spread through the…

Machine Learning · Statistics 2025-06-23 Baike She , Lei Xin , Philip E. Paré , Matthew Hale

The fast transmission rate of COVID-19 worldwide has made this virus the most important challenge of year 2020. Many mitigation policies have been imposed by the governments at different regional levels (country, state, county, and city) to…

Applications · Statistics 2022-05-04 Yue Bai , Abolfazl Safikhani , George Michailidis

Spatiotemporal forecasting has various applications in neuroscience, climate and transportation domain. Traffic forecasting is one canonical example of such learning task. The task is challenging due to (1) complex spatial dependency on…

Machine Learning · Computer Science 2018-02-26 Yaguang Li , Rose Yu , Cyrus Shahabi , Yan Liu

Graph convolutional neural networks (GCNs) have shown tremendous promise in addressing data-intensive challenges in recent years. In particular, some attempts have been made to improve predictions of Susceptible-Infected-Recovered (SIR)…

Machine Learning · Statistics 2025-01-07 Petr Kisselev , Padmanabhan Seshaiyer

The COVID-19 pandemic has spread globally for several months. Because its transmissibility and high pathogenicity seriously threaten people's lives, it is crucial to accurately and quickly detect COVID-19 infection. Many recent studies have…

Image and Video Processing · Electrical Eng. & Systems 2021-02-15 Xin He , Shihao Wang , Xiaowen Chu , Shaohuai Shi , Jiangping Tang , Xin Liu , Chenggang Yan , Jiyong Zhang , Guiguang Ding

Objective: COVID-19 has spread worldwide and made a huge influence across the world. Modeling the infectious spread situation of COVID-19 is essential to understand the current condition and to formulate intervention measurements.…

Machine Learning · Computer Science 2023-06-23 Ruhan Liu , Jiajia Li , Yang Wen , Huating Li , Ping Zhang , Bin Sheng , David Dagan Feng

The recent outbreak of COVID-19 has affected millions of individuals around the world and has posed a significant challenge to global healthcare. From the early days of the pandemic, it became clear that it is highly contagious and that…

Social and Information Networks · Computer Science 2021-04-13 George Panagopoulos , Giannis Nikolentzos , Michalis Vazirgiannis

We extend the classical SIR model of infectious disease spread to account for time dependence in the parameters, which also include diffusivities. The temporal dependence accounts for the changing characteristics of testing, quarantine and…

Populations and Evolution · Quantitative Biology 2020-07-03 Zhenlin Wang , Xiaoxuan Zhang , Gregory Teichert , Mariana Carrasco-Teja , Krishna Garikipati

Accurate forecasts of COVID-19 is central to resource management and building strategies to deal with the epidemic. We propose a heterogeneous infection rate model with human mobility for epidemic modeling, a preliminary version of which we…

Populations and Evolution · Quantitative Biology 2020-05-06 Ajitesh Srivastava , Viktor K. Prasanna

We present an interpretable high-resolution spatio-temporal model to estimate COVID-19 deaths together with confirmed cases one-week ahead of the current time, at the county-level and weekly aggregated, in the United States. A notable…

Applications · Statistics 2021-08-24 Shixiang Zhu , Alexander Bukharin , Liyan Xie , Mauricio Santillana , Shihao Yang , Yao Xie

The paper presents classification and analysis of the mathematical models of COVID-19 spread in different groups of populations such as the family, school, office (3-100 people), neighborhood (100-5000 people), city, region (0.5-15 million…

Populations and Evolution · Quantitative Biology 2022-02-01 O. I. Krivorotko , S. I. Kabanikhin

In this work, we study the pandemic course in the United States by considering national and state levels data. We propose and compare multiple time-series prediction techniques which incorporate auxiliary variables. One type of approach is…

Predicting the number of infections in the anti-epidemic process is extremely beneficial to the government in developing anti-epidemic strategies, especially in fine-grained geographic units. Previous works focus on low spatial resolution…

Machine Learning · Computer Science 2022-07-18 Pengyue Jia , Ling Chen , Dandan Lyu

The rapid transmission of the highly contagious novel coronavirus has been represented through several data-guided approaches across targeted geographies, in an attempt to understand when the pandemic will be under control and imposed…

Populations and Evolution · Quantitative Biology 2020-05-05 Joydeep Munshi , Indranil Roy , Ganesh Balasubramanian

Non-Pharmaceutical Interventions (NPIs), such as social gathering restrictions, have shown effectiveness to slow the transmission of COVID-19 by reducing the contact of people. To support policy-makers, multiple studies have first modeled…

Machine Learning · Computer Science 2022-12-13 Yang Liu , Yu Rong , Zhuoning Guo , Nuo Chen , Tingyang Xu , Fugee Tsung , Jia Li

A physics-informed neural network (PINN) embedded with the susceptible-infected-removed (SIR) model is devised to understand the temporal evolution dynamics of infectious diseases. Firstly, the effectiveness of this approach is demonstrated…

Quantitative Methods · Quantitative Biology 2025-04-08 Shuai Han , Lukas Stelz , Horst Stoecker , Lingxiao Wang , Kai Zhou

Network models represent a useful tool to describe the complex set of financial relationships among heterogeneous firms in the system. In this paper, we propose a new semiparametric model for temporal multilayer causal networks with both…

Econometrics · Economics 2021-01-05 Billio Monica , Casarin Roberto , Costola Michele , Iacopini Matteo