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Scientific workflows process extensive data sets over clusters of independent nodes, which requires a complex stack of infrastructure components, especially a resource manager (RM) for task-to-node assignment, a distributed file system…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-08-12 Fabian Lehmann , Jonathan Bader , Friedrich Tschirpke , Ninon De Mecquenem , Ansgar Lößer , Soeren Becker , Katarzyna Ewa Lewińska , Lauritz Thamsen , Ulf Leser

Scientific workflow management systems enable the reproducible execution of data analysis pipelines on cluster infrastructures managed by resource managers such as Kubernetes, Slurm, or HTCondor. These resource managers require resource…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-03 Jonathan Bader , Ansgar Lößer , Lauritz Thamsen , Björn Scheuermann , Odej Kao

Many scientific workflow scheduling algorithms need to be informed about task runtimes a-priori to conduct efficient scheduling. In heterogeneous cluster infrastructures, this problem becomes aggravated because these runtimes are required…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-05-24 Jonathan Bader , Fabian Lehmann , Lauritz Thamsen , Jonathan Will , Ulf Leser , Odej Kao

Scientific workflows are pipelines of interdependent tasks. They are increasingly executed on shared Kubernetes clusters via workflow engines such as Nextflow. Their energy consumption matters for both cost and sustainability. It is…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-22 Philipp Thamm , Somayeh Mohammadi , Kathleen West , Knut Reinert , Lauritz Thamsen , Ulf Leser

In the era of data-driven science, conducting computational experiments that involve analysing large datasets using heterogeneous computational clusters, is part of the everyday routine for many scientists. Moreover, to ensure the…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-23 Thanasis Vergoulis , Konstantinos Zagganas , Loukas Kavouras , Martin Reczko , Stelios Sartzetakis , Theodore Dalamagas

Scientific workflow management systems support large-scale data analysis on cluster infrastructures. For this, they interact with resource managers which schedule workflow tasks onto cluster nodes. In addition to workflow task descriptions,…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-30 Jonathan Bader , Kathleen West , Soeren Becker , Svetlana Kulagina , Fabian Lehmann , Lauritz Thamsen , Henning Meyerhenke , Odej Kao

Scientific workflow management systems (SWMSs) and resource managers together ensure that tasks are scheduled on provisioned resources so that all dependencies are obeyed, and some optimization goal, such as makespan minimization, is…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-17 Fabian Lehmann , Jonathan Bader , Friedrich Tschirpke , Lauritz Thamsen , Ulf Leser

Data-intensive scientific workflows increasingly rely on high-performance computing (HPC) systems, complementing traditional Grid and Cloud platforms. However, workflow scheduling on HPC infrastructures remains challenging due to the…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-11-26 Aurelio Vivas , Harold Castro

With the increasing amount of data available to scientists in disciplines as diverse as bioinformatics, physics, and remote sensing, scientific workflow systems are becoming increasingly important for composing and executing scalable data…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-03-20 Jonathan Bader , Nils Diedrich , Lauritz Thamsen , Odej Kao

Scientific workflows are used to analyze large amounts of data. These workflows comprise numerous tasks, many of which are executed repeatedly, running the same custom program on different inputs. Users specify resource allocations for each…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-11 Fabian Lehmann , Jonathan Bader , Ninon De Mecquenem , Xing Wang , Vasilis Bountris , Florian Friederici , Ulf Leser , Lauritz Thamsen

While detailed resource usage monitoring is possible on the low-level using proper tools, associating such usage with higher-level abstractions in the application layer that actually cause the resource usage in the first place presents a…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-02 Joel Witzke , Ansgar Lößer , Vasilis Bountris , Florian Schintke , Björn Scheuermann

Scientific workflows are critical to scientific data analysis and often involve computationally intensive processing of large datasets on compute clusters. As such, their execution tends to be long-running and resource-intensive, resulting…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-09 Kathleen West , Youssef Moawad , Fabian Lehmann , Vasilis Bountris , Ulf Leser , Yehia Elkhatib , Lauritz Thamsen

Many resource management techniques for task scheduling, energy and carbon efficiency, and cost optimization in workflows rely on a-priori task runtime knowledge. Building runtime prediction models on historical data is often not feasible…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-09-14 Jonathan Bader , Fabian Lehmann , Lauritz Thamsen , Ulf Leser , Odej Kao

Scientific workflows typically comprise a multitude of different processing steps which often are executed in parallel on different partitions of the input data. These executions, in turn, must be scheduled on the compute nodes of the…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-10-18 Jonathan Bader , Fabian Lehmann , Alexander Groth , Lauritz Thamsen , Dominik Scheinert , Jonathan Will , Ulf Leser , Odej Kao

In science, problems in many fields can be solved by processing datasets using a series of computationally expensive algorithms, sometimes referred to as workflows. Traditionally, the configurations of these workflows are optimized to…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-20 Philipp Thamm , Ulf Leser

Scientific workflows are widely used to automate scientific data analysis and often involve processing large quantities of data on compute clusters. As such, their execution tends to be long-running and resource intensive, leading to…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-20 Kathleen West , Fabian Lehmann , Vasilis Bountris , Ulf Leser , Yehia Elkhatib , Lauritz Thamsen

Over the last two decades, scientific workflow management systems (SWfMS) have emerged as a means to facilitate the design, execution, and monitoring of reusable scientific data processing pipelines. At the same time, the amounts of data…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-03-29 Marc Bux , Ulf Leser

Large-scale interactive web services and advanced AI applications make sophisticated decisions in real-time, based on executing a massive amount of computation tasks on thousands of servers. Task schedulers, which often operate in…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-28 Qiong Wu , Zhenming Liu

As the amount of available data continues to grow in fields as diverse as bioinformatics, physics, and remote sensing, the importance of scientific workflows in the design and implementation of reproducible data analysis pipelines…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-11 Jonathan Bader , Fabian Skalski , Fabian Lehmann , Dominik Scheinert , Jonathan Will , Lauritz Thamsen , Odej Kao

Although High Performance Computing (HPC) users understand basic resource requirements such as the number of CPUs and memory limits, internal infrastructural utilization data is exclusively leveraged by cluster operators, who use it to…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-19 Abel Souza , Kristiaan Pelckmans , Johan Tordsson
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