Related papers: Graphs can be succinctly indexed for pattern match…

Bidimensionality is the most common technique to design subexponential-time parameterized algorithms on special classes of graphs, particularly planar graphs. The core engine behind it is a combinatorial lemma of Robertson, Seymour and…

This paper presents a new anytime algorithm for the marginal MAP problem in graphical models. The algorithm is described in detail, its complexity and convergence rate are studied, and relations to previous theoretical results for the…

In a graph $G = (V,E)$, a vertex subset $S\subseteq V(G)$ is said to be a dominating set of $G$ if every vertex not in $S$ is adjacent to a vertex in $S$. A dominating set $S$ of $G$ is called a paired-dominating set of $G$ if the induced…

Let $G=(V,E)$ be an undirected unweighted graph on $n$ vertices and $m$ edges. We address the problem of sensitivity oracle for all-pairs mincuts in $G$ defined as follows. Build a compact data structure that, on receiving any pair of…

Let $G$ be a finite simple graph on the vertex set $V(G) = \{x_1, \ldots, x_n\}$ and $I(G) \subset K[V(G)]$ its edge ideal, where $K[V(G)]$ is the polynomial ring in $x_1, \ldots, x_n$ over a field $K$ with each ${\rm deg} x_i = 1$ and…

Many natural computational problems, including e.g. Max Weight Independent Set, Feedback Vertex Set, or Vertex Planarization, can be unified under an umbrella of finding the largest sparse induced subgraph, that satisfies some property…

Graphs are widely used for describing systems made up of many interacting components and for understanding the structure of their interactions. Various statistical models exist, which describe this structure as the result of a combination…

We study the problem of indexing text with wildcard positions, motivated by the challenge of aligning sequencing data to large genomes that contain millions of single nucleotide polymorphisms (SNPs)---positions known to differ between…

In a graph $G=(V,E)$ with no isolated vertex, a dominating set $D \subseteq V$, is called a semitotal dominating set if for every vertex $u \in D$ there is another vertex $v \in D$, such that distance between $u$ and $v$ is at most two in…

In this paper we study the problem of answering connectivity queries about a \emph{graph timeline}. A graph timeline is a sequence of undirected graphs $G_1,\ldots,G_t$ on a common set of vertices of size $n$ such that each graph is…

We study the complexity of the problems of finding, given a graph $G$, a largest induced subgraph of $G$ with all degrees odd (called an odd subgraph), and the smallest number of odd subgraphs that partition $V(G)$. We call these parameters…

We describe a polynomial-time algorithm which, given a graph $G$ with treewidth $t$, approximates the pathwidth of $G$ to within a ratio of $O(t\sqrt{\log t})$. This is the first algorithm to achieve an $f(t)$-approximation for some…

Recent work has shown that not only decision trees (DTs) may not be interpretable but also proposed a polynomial-time algorithm for computing one PI-explanation of a DT. This paper shows that for a wide range of classifiers, globally…

Graph signals offer a very generic and natural representation for data that lives on networks or irregular structures. The actual data structure is however often unknown a priori but can sometimes be estimated from the knowledge of the…

We investigate the limits of one of the fundamental ideas in data structures: fractional cascading. This is an important data structure technique to speed up repeated searches for the same key in multiple lists and it has numerous…

We present two new and efficient algorithms for computing all-pairs shortest paths. The algorithms operate on directed graphs with real (possibly negative) weights. They make use of directed path consistency along a vertex ordering d. Both…

We give the first almost-linear time algorithm for computing the \emph{maximal $k$-edge-connected subgraphs} of an undirected unweighted graph for any constant $k$. More specifically, given an $n$-vertex $m$-edge graph $G=(V,E)$ and a…

We study the problem of robustly estimating the edge density of Erd\H{o}s-R\'enyi random graphs $G(n, d^\circ/n)$ when an adversary can arbitrarily add or remove edges incident to an $\eta$-fraction of the nodes. We develop the first…

We consider the problem of approximating the girth, $g$, of an unweighted and undirected graph $G=(V,E)$ with $n$ nodes and $m$ edges. A seminal result of Itai and Rodeh [SICOMP'78] gave an additive $1$-approximation in $O(n^2)$ time, and…

We consider an index data structure for similar strings. The generalized suffix tree can be a solution for this. The generalized suffix tree of two strings $A$ and $B$ is a compacted trie representing all suffixes in $A$ and $B$. It has…