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Related papers: SAT-assembly: A new approach for designing self-as…

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The Boolean satisfiability problem (SAT) holds a central place in computational complexity theory as the first shown NP-complete problem. Due to this role, SAT is often used as the benchmark for polynomial-time reductions: if a problem can…

Logic in Computer Science · Computer Science 2025-10-21 Yumiko Nishiyama

Theories of phase change and self-assembly often invoke the idea of a `quasiequilibrium', a regime in which the nonequilibrium association of building blocks results nonetheless in a structure whose properties are determined solely by an…

Statistical Mechanics · Physics 2013-07-22 Stephen Whitelam , Rebecca Schulman , Lester Hedges

Mutually repelling particles form spontaneously ordered clusters when forced into confinement. The clusters may adopt similar spatial arrangements even if the underlying particle interactions are contrastingly different. Here we demonstrate…

Soft Condensed Matter · Physics 2026-02-13 P. D. S. de Lima , R. De La Cour , K. Gaff , J. M. de Araújo , S. J. Cox , M. S. Ferreira , S. Hutzler

We extend the well-known theoretical treatment of the spontaneous symmetry breaking (SSB) in two-component systems, combining linear coupling and self-attractive nonlinearity, to a system in which the linear coupling competes with repulsive…

Pattern Formation and Solitons · Physics 2020-08-12 Hidetsugu Sakaguchi , Boris A. Malomed

A challenge of molecular self-assembly is to understand how to design particles that self-assemble into a desired structure and not any of a potentially large number of undesired structures. Here we use simulation to show that a strategy of…

Statistical Mechanics · Physics 2017-02-27 Stephen Whitelam

Molecular building blocks interacting at the nanoscale organize spontaneously into stable mono- layers that display intriguing long-range ordering motifs on the surface of atomic substrates. The patterning process, if appropriately…

Mesoscale and Nanoscale Physics · Physics 2011-02-18 Marta Balbás Gambra , Carsten Rohr , Kathrin Gruber , Bianca Hermann , Thomas Franosch

Controlled micro- to meso-scale porosity is a common materials design goal with possible applications ranging from molecular gas adsorption to particle size selective permeability or solubility. Here, we use inverse methods of statistical…

Soft Condensed Matter · Physics 2016-03-11 Beth A. Lindquist , Ryan B. Jadrich , Thomas M. Truskett

Assembly of multi-part physical structures is both a valuable end product for autonomous robotics, as well as a valuable diagnostic task for open-ended training of embodied intelligent agents. We introduce a naturalistic physics-based…

Many remarkably robust, rapid and spontaneous self-assembly phenomena in nature can be modeled geometrically starting from a collection of rigid bunches of spheres. This paper highlights the role of symmetry in sphere-based assembly…

Combinatorics · Mathematics 2016-03-15 Meera Sitharam , Andrew Vince , Menghan Wang , Miklos Bona

Interactions between the components in many-body systems can give rise to spontaneous formation of complex structures. Usually very little is known about the connection between the interactions and the resulting structure. Here we present a…

Soft Condensed Matter · Physics 2014-05-16 Erik Edlund , Oskar Lindgren , Martin Nilsson Jacobi

We consider the self-assembly of composite structures from a group of nanocomponents, each consisting of particles within an $N$-atom system. Self-assembly pathways and rates for nanocomposites are derived via a multiscale analysis of the…

Biological Physics · Physics 2014-01-06 Stephen Pankavich , Peter Ortoleva

We study theoretically a binary system in which an attraction of unlike particles is combined with a type-independent soft core repulsion. The possible experimental implementation of the system is a mixture of DNA-covered colloids, in which…

Soft Condensed Matter · Physics 2007-05-23 Alexei V. Tkachenko

In this paper we propose the approach for constructing partitionings of hard variants of the Boolean satisfiability problem (SAT). Such partitionings can be used for solving corresponding SAT instances in parallel. For the same SAT instance…

Artificial Intelligence · Computer Science 2015-10-23 Alexander Semenov , Oleg Zaikin

Molecular self-assembly on surfaces constitutes a powerful method for creating tailor-made surface structures with dedicated functionalities. Varying the intermolecular interactions allows for tuning the resulting molecular structures in a…

Mesoscale and Nanoscale Physics · Physics 2020-07-24 Christoph Schiel , Maximilian Vogtland , Ralf Bechstein , Angelika Kühnle , Philipp Maass

Shape assembly composes complex shapes geometries by arranging simple part geometries and has wide applications in autonomous robotic assembly and CAD modeling. Existing works focus on geometry reasoning and neglect the actual physical…

Computer Vision and Pattern Recognition · Computer Science 2023-03-14 Yichen Li , Kaichun Mo , Yueqi Duan , He Wang , Jiequan Zhang , Lin Shao , Wojciech Matusik , Leonidas Guibas

Autonomous assembly is a crucial capability for robots in many applications. For this task, several problems such as obstacle avoidance, motion planning, and actuator control have been extensively studied in robotics. However, when it comes…

Computer Vision and Pattern Recognition · Computer Science 2020-03-25 Yichen Li , Kaichun Mo , Lin Shao , Minhyuk Sung , Leonidas Guibas

Self-assembly of complex and functional materials remains a grand challenge in soft material science. Efficient assembly depends on a delicate balance between thermodynamic and kinetic effects, requiring fine-tuning affinities and…

Soft Condensed Matter · Physics 2024-11-14 Wei-Shao Wei , Anthony Trubiano , Christian Sigl , Stefan Paquay , Hendrik Dietz , Michael F. Hagan , Seth Fraden

Winfree's abstract Tile Assembly Model (aTAM) is a model of molecular self-assembly of DNA complexes known as tiles, which float freely in solution and attach one at a time to a growing "seed" assembly based on specific binding sites on…

Computational Complexity · Computer Science 2015-03-17 Ho-Lin Chen , David Doty , Shinnosuke Seki

A hallmark of living systems is the ability to employ a common set of versatile building blocks that can self-organize into a multitude of different structures, in a way that can be controlled with minimal cost. This capability can only be…

Statistical Mechanics · Physics 2022-01-26 Saeed Osat , Ramin Golestanian

The algorithmic self-assembly of shapes has been considered in several models of self-assembly. For the problem of \emph{shape construction}, we consider an extended version of the Two-Handed Tile Assembly Model (2HAM), which contains…

Computational Geometry · Computer Science 2016-08-18 Austin Luchsinger , Robert Schweller , Tim Wylie
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