Related papers: Sequence Reconstruction Problem for Deletion Chann…
We address a discrete tomography problem that arises in the study of the atomic structure of crystal lattices. A polyatomic structure T can be defined as an integer lattice in dimension D>=2, whose points may be occupied by $c$ distinct…
Consider the recursive relation generating a new positive integer $n_{\ell +1}$ from the positive integer $n_{\ell }$ according to the following simple rules: if the integer $n_{\ell }$ is odd, $n_{\ell +1}=3n_{\ell }+1$; if the integer…
There exists a minimum integer $N$ such that any 2-coloring of $\{1,2,...,N\}$ admits a monochromatic solution to $x+y+kz =\ell w$ for $k,\ell \in \mathbb{Z}^+$, where $N$ depends on $k$ and $\ell$. We determine $N$ when $\ell-k \in…
In this effort, we propose a convex optimization approach based on weighted $\ell_1$-regularization for reconstructing objects of interest, such as signals or images, that are sparse or compressible in a wavelet basis. We recover the…
In this paper, we investigate the reconstruction of permutations on {1, 2, ..., n} from betweenness constraints involving the minimum and the maximum element located between t and t+1, for all t=1, 2, ..., n-1. We propose two variants of…
Given two arbitrary sequences of denoisers for block lengths tending to infinity we ask if it is possible to construct a third sequence of denoisers with an asymptotically vanishing (in block length) excess expected loss relative to the…
In this paper, we reformulate the non-convex $\ell_q$-norm minimization problem with $q\in(0,1)$ into a 2-step problem, which consists of one convex and one non-convex subproblems, and propose a novel iterative algorithm called QISTA…
A single deletion error correcting code (SDECC) is a set of fixed-length sequences consisting of two types of symbols, 0 and 1, such that the original sequence can be recovered for at most one deletion error. The upper bound for the size of…
A set of $N$ permutations of $\{1,2,\dots,v\}$ is $(N,v,t)$-suitable if each symbol precedes each subset of $t-1$ others in at least one permutation. The central problems are to determine the smallest $N$ for which such a set exists for…
In the random deletion channel, each bit is deleted independently with probability $p$. For the random deletion channel, the existence of codes of rate $(1-p)/9$, and thus bounded away from $0$ for any $p < 1$, has been known. We give an…
With the emergence of new storage and communication methods, the insertion, deletion, and substitution (IDS) channel has attracted considerable attention. However, many topics on the IDS channel and the associated Levenshtein distance…
Varshamov-Tenengolts (VT) codes are a class of codes which can correct a single deletion or insertion with a linear-time decoder. This paper addresses the problem of efficient encoding of non-binary VT codes, defined over an alphabet of…
The $k$-colouring reconfiguration problem asks whether, for a given graph $G$, two proper $k$-colourings $\alpha$ and $\beta$ of $G$, and a positive integer $\ell$, there exists a sequence of at most $\ell+1$ proper $k$-colourings of $G$…
We first give a construction of binary $t_1$-deletion-$t_2$-insertion-burst correcting codes with redundancy at most $\log(n)+(t_1-t_2-1)\log\log(n)+O(1)$, where $t_1\ge 2t_2$. Then we give an improved construction of binary codes capable…
The problem of channel coding with the erasure option is revisited for discrete memoryless channels. The interplay between the code rate, the undetected and total error probabilities is characterized. Using the information spectrum method,…
In this paper, we propose a partitioning technique that decomposes a pair of sequences with overlapping $t$-deletion $s$-substitution balls into sub-pairs, where the $^{\leq}t$-burst-deletion balls of each sub-pair intersect. This…
This paper introduces a neural polar decoder (NPD) for deletion channels with a constant deletion rate. Existing polar decoders for deletion channels exhibit high computational complexity of $O(N^4)$, where $N$ is the block length. This…
Owing to its several merits over other DNA sequencing technologies, nanopore sequencers hold an immense potential to revolutionize the efficiency of DNA storage systems. However, their higher error rates necessitate further research to…
Explicit non-asymptotic upper bounds on the sizes of multiple-deletion correcting codes are presented. In particular, the largest single-deletion correcting code for $q$-ary alphabet and string length $n$ is shown to be of size at most…
We introduce a new variant of the $k$-deck problem, which in its traditional formulation asks for determining the smallest $k$ that allows one to reconstruct any binary sequence of length $n$ from the multiset of its $k$-length…