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Dimensionality reduction (DR) is a well-established approach for the visualization of high-dimensional data sets. While DR methods are often applied to typical DR benchmark data sets in the literature, they might suffer from high runtime…

Machine Learning · Computer Science 2024-08-09 Luca Reichmann , David Hägele , Daniel Weiskopf

A strategy to assist visualization and analysis of large and complex data sets is dimensionality reduction, with which one maps each data point into a low-dimensional manifold. However, various dimensionality reduction techniques are…

Physics and Society · Physics 2024-10-21 Chanon Thongprayoon , Naoki Masuda

We present a set of algorithms implementing multidimensional scaling (MDS) for large data sets. MDS is a family of dimensionality reduction techniques using a $n \times n$ distance matrix as input, where $n$ is the number of individuals,…

Computation · Statistics 2024-02-02 Pedro Delicado , Cristian Pachón-García

The dramatic growth of big datasets presents a new challenge to data storage and analysis. Data reduction, or subsampling, that extracts useful information from datasets is a crucial step in big data analysis. We propose an orthogonal…

Methodology · Statistics 2021-06-01 Lin Wang , Jake Elmstedt , Weng Kee Wong , Hongquan Xu

Dimensionality reduction methods are very common in the field of high dimensional data analysis. Typically, algorithms for dimensionality reduction are computationally expensive. Therefore, their applications for the analysis of massive…

Machine Learning · Statistics 2015-11-04 Yariv Aizenbud , Amit Bermanis , Amir Averbuch

Multidimensional scaling is a statistical process that aims to embed high dimensional data into a lower-dimensional space; this process is often used for the purpose of data visualisation. Common multidimensional scaling algorithms tend to…

Machine Learning · Computer Science 2022-02-25 Pierre Lambert , Cyril de Bodt , Michel Verleysen , John Lee

Multidimensional scaling (MDS) is a popular dimensionality reduction techniques that has been widely used for network visualization and cooperative localization. However, the traditional stress minimization formulation of MDS necessitates…

Optimization and Control · Mathematics 2016-12-22 Ketan Rajawat , Sandeep Kumar

Most current sampling algorithms for high-dimensional distributions are based on MCMC techniques and are approximate in the sense that they are valid only asymptotically. Rejection sampling, on the other hand, produces valid samples, but is…

Artificial Intelligence · Computer Science 2012-07-04 Marc Dymetman , Guillaume Bouchard , Simon Carter

Neural ordinary differential equations (NODE) have garnered significant attention for their design of continuous-depth neural networks and the ability to learn data/feature dynamics. However, for high-dimensional systems, estimating…

Machine Learning · Computer Science 2025-10-07 Muhao Guo , Haoran Li , Yang Weng

Multidimensional Scaling (MDS) is a classical technique for embedding data in low dimensions, still in widespread use today. Originally introduced in the 1950's, MDS was not designed with high-dimensional data in mind; while it remains…

Statistics Theory · Mathematics 2018-02-01 Erez Peterfreund , Matan Gavish

In many modern data sets, High dimension low sample size (HDLSS) data is prevalent in many fields of studies. There has been an increased focus recently on using machine learning and statistical methods to mine valuable information out of…

Optimization and Control · Mathematics 2023-05-23 Srivathsan Amruth , Xin Yee Lam

Multidimensional Scaling (MDS) is one of the most popular methods for dimensionality reduction and visualization of high dimensional data. Apart from these tasks, it also found applications in the field of geometry processing for the…

Computational Geometry · Computer Science 2017-09-12 Amit Boyarski , Alex M. Bronstein , Michael M. Bronstein

Recent research underscores the pivotal role of the Out-of-Distribution (OOD) feature representation field scale in determining the efficacy of models in OOD detection. Consequently, the adoption of model ensembles has emerged as a…

Machine Learning · Computer Science 2024-08-19 Chenhui Xu , Fuxun Yu , Zirui Xu , Nathan Inkawhich , Xiang Chen

Multidimensional scaling (MDS) is the act of embedding proximity information about a set of $n$ objects in $d$-dimensional Euclidean space. As originally conceived by the psychometric community, MDS was concerned with embedding a fixed set…

Machine Learning · Statistics 2024-12-12 Michael W. Trosset , Carey E. Priebe

Let $X=\mathbf{X}\cup\mathbf{Z}$ be a data set in $\mathbb{R}^D$, where $\mathbf{X}$ is the training set and $\mathbf{Z}$ is the test one. Many unsupervised learning algorithms based on kernel methods have been developed to provide…

Machine Learning · Statistics 2018-04-27 Jianzhong Wang

Multidimensional scaling (MDS) is a dimensionality reduction tool used for information analysis, data visualization and manifold learning. Most MDS procedures embed data points in low-dimensional Euclidean (flat) domains, such that…

Computational Geometry · Computer Science 2018-10-23 Gil Shamai , Michael Zibulevsky , Ron Kimmel

Large-scale deep learning models contribute to significant performance improvements on varieties of downstream tasks. Current data and model parallelism approaches utilize model replication and partition techniques to support the…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-19 Youhe Jiang , Fangcheng Fu , Xupeng Miao , Xiaonan Nie , Bin Cui

A class of neural networks that gained particular interest in the last years are neural ordinary differential equations (neural ODEs). We study input-output relations of neural ODEs using dynamical systems theory and prove several results…

Dynamical Systems · Mathematics 2023-09-29 Christian Kuehn , Sara-Viola Kuntz

The vast majority of Dimensionality Reduction (DR) techniques rely on second-order statistics to define their optimization objective. Even though this provides adequate results in most cases, it comes with several shortcomings. The methods…

Computer Vision and Pattern Recognition · Computer Science 2017-08-21 Nikolaos Passalis , Anastasios Tefas

The central goal of this paper is to establish two commonly available dimensionality reduction (DR) methods i.e. t-distributed Stochastic Neighbor Embedding (t-SNE) and Multidimensional Scaling (MDS) in Matlab and to observe their…

Machine Learning · Computer Science 2020-11-19 Shadman Sakib , Md. Abu Bakr Siddique , Md. Abdur Rahman
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