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The complexity of an ecological community can be distilled into a network, where diverse interactions connect species in a web of dependencies. Species interact not only with each other but indirectly through environmental effects, however…

Populations and Evolution · Quantitative Biology 2020-09-09 Justin D. Yeakel , Mathias M. Pires , Marcus A. M. de Aguiar , James L. O'Donnell , Paulo R. Guimarães , Dominique Gravel , Thilo Gross

Modelling how populations respond to habitat loss is crucial for understanding ecosystem stability, especially when positive interactions among resource species, such as plant-plant facilitation, play a key role. Habitat loss not only…

Dynamical Systems · Mathematics 2026-04-20 Teodoro Mayayo , Josep Sardanyés , Joan Torregrosa

All organisms, fundamentally, are made from the same raw material, namely the elements of the periodic table. Biochemical diversity is achieved with how these elements are utilized, for what purpose and in which physical location.…

Subcellular Processes · Quantitative Biology 2022-10-27 Stefan Schmollinger , Si Chen , Sabeeha S. Merchant

Decapod crustaceans have appendages with an array of rigid hairs covered in chemo-receptors, used to sense and track food. Crustaceans directly influence the flow behavior by changing the speed of flow past the hairy surface, thereby…

Fluid Dynamics · Physics 2019-11-27 Kaitlyn Hood , M. S. Suryateja Jammalamadaka , A. E. Hosoi

This paper proposes a mathematical model for replicating a simple dynamics in an aquarium with two components; bacteria and organic matter. The model is based on a system of partial differential equations (PDEs) with four components: the…

Analysis of PDEs · Mathematics 2024-01-23 Ken Furukawa , Hiroyuki Kitahata

Offshore wind is rapidly expanding to meet clean and secure energy needs. New developments are now increasingly constrained to deep seasonally stratified waters. Here, flows past offshore wind infrastructure will increase water column…

Fluid Dynamics · Physics 2026-02-12 Charlie J. Lloyd , Robert M. Dorrell

A striking feature of the marine ecosystem is the regularity in its size spectrum: the abundance of organisms as a function of their weight approximately follows a power law over almost ten orders of magnitude. We interpret this as evidence…

Populations and Evolution · Quantitative Biology 2010-09-17 Jose A. Capitan , Gustav W. Delius

The methane cycle is a key component of the Earth system that links planetary climate, biological metabolism, and the global biogeochemical cycles of carbon, oxygen, sulfur, and hydrogen. However, currently lacking is a numerical model…

Atmospheric and Oceanic Physics · Physics 2020-07-31 Christopher T. Reinhard , Stephanie L. Olson , Sandra Kirtland Turner , Cecily Palike , Yoshiki Kanzaki , Andy Ridgwell

Ecosystem approach to fisheries requires a thorough understanding of fishing impacts on ecosystem status and processes as well as predictive tools such as ecosystem models to provide useful information for management. The credibility of…

Quantitative Methods · Quantitative Biology 2024-04-30 Ricardo Oliveros-Ramos , Philippe Verley , Yunne-Jai Shin

Carbon dioxide (CO2) increase has been well documented, and global net primary production is of importance to a variety of ecological topics. Since CO2 increases primary production in laboratory experiments, the global effects of increasing…

Atmospheric and Oceanic Physics · Physics 2018-12-27 Benjamin Helyer , Michael Courtney

Interactions of hydrocarbons (HCs) and clay surfaces are responsible for fluid behaviour within shale reservoirs. These interactions are affected by the diversity of HC components and the variations in environmental conditions. This study…

Materials Science · Physics 2024-04-18 Rixin Zhao , Haitao Xue , Shuangfang Lu , H. Chris Greenwell , Valentina Erastova

Atmosphere and ocean are coupled via air-sea interactions. The atmospheric conditions fuel the ocean circulation and its variability, but the extent to which ocean processes can affect the atmosphere at decadal time scales remains unclear.…

Atmospheric and Oceanic Physics · Physics 2021-07-08 Navid C. Constantinou , Andrew McC. Hogg

The interdependence between an individual strategy decision and the resulting change of environmental state is often a subtle process. Feedback-evolving games have been a prevalent framework for studying such feedback in well-mixed…

Populations and Evolution · Quantitative Biology 2025-03-05 Qiushuang Wang , Xiaojie Chen , Attila Szolnoki

Population balance framework is a useful tool that can be used to describe size distribution of droplets in a liquid-liquid dispersion. Breakup and coalescence models provide closures for mathematical formulation of the population balance…

Fluid Dynamics · Physics 2015-11-25 Marcin Traczyk , Robert Sawko , Chris Thompson

Ecological resilience refers to the ability of a system to retain its state when subject to state variables perturbations or parameter changes. While understanding and quantifying resilience is crucial to anticipate the possible regime…

Dynamical Systems · Mathematics 2019-05-10 Artur César Fassoni , Denis de Carvalho Braga

Living systems such as neuronal networks and animal groups process information about their environment via the dynamics of interacting units. These can transition between distinct macroscopic behaviors. Near such a transition (or critical…

Inspired by the similarity of the atmosphere-ocean physical coupling mechanism, this study innovatively migrates meteorological large-model techniques to the ocean domain, constructing the KunPeng global ocean environmental prediction…

Machine Learning · Computer Science 2025-04-08 Yi Zhao , Jiaqi Li , Haitao Xia , Tianjiao Zhang , Zerong Zeng , Tianyu Ren , Yucheng Zhang , Chao Zhu , Shengtong Xu , Hongchun Yuan

The maintenance of diversity, the `commonness of rarity', and compositional turnover are ubiquitous features of species-rich communities. Through a minimal model, we consider how these features reflect the interplay between environmental…

Populations and Evolution · Quantitative Biology 2025-12-04 Emil Mallmin , Arne Traulsen , Silvia De Monte

The spatio-temporal dynamics of a population present one of the most fascinating aspects and challenges for ecological modelling. In this article we review some simple mathematical models, based on one dimensional…

Populations and Evolution · Quantitative Biology 2008-11-18 A. B. Ryabov , B. Blasius

Chemical waves constitute a known class of dissipative structures emerging in reaction-diffusion systems. They play a crucial role in biology, spreading information rapidly to synchronize and coordinate biological events. We develop a…

Statistical Mechanics · Physics 2020-09-16 Francesco Avanzini , Gianmaria Falasco , Massimiliano Esposito