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Related papers: The Space of Barcode Bases for Persistence Modules

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We extend the persistence algorithm, viewed as an algorithm computing the homology of a complex of free persistence or graded modules, to complexes of modules that are not free. We replace persistence modules by their presentations and…

Algebraic Topology · Mathematics 2024-03-19 Tamal K. Dey , Florian Russold , Shreyas N. Samaga

Extended persistence is a technique from topological data analysis to obtain global multiscale topological information from a graph. This includes information about connected components and cycles that are captured by the so-called…

Machine Learning · Computer Science 2024-06-06 Simon Zhang , Soham Mukherjee , Tamal K. Dey

In this note we recall the relations between the barcodes in level and sub-level persistence and make precise their relation with the Morse-Novikov complex of a Morse real- or angle-valued map. The results in this papers are implicit in my…

Algebraic Topology · Mathematics 2018-06-01 Dan Burghelea

Let $K$ be a finite simplicial, cubical, delta or CW complex. The persistence map $\mathrm{PH}$ takes a filter $f:K \rightarrow \mathbb{R}$ as input and returns the barcodes $\mathrm{PH}(f)$ of the associated sublevel set persistent…

Computational Geometry · Computer Science 2021-10-29 Jacob Leygonie , Gregory Henselman-Petrusek

Algorithms for persistent homology and zigzag persistent homology are well-studied for persistence modules where homomorphisms are induced by inclusion maps. In this paper, we propose a practical algorithm for computing persistence under…

Computational Geometry · Computer Science 2014-03-26 Tamal K. Dey , Fengtao Fan , Yusu Wang

In medical image analysis, feature engineering plays an important role in the design and performance of machine learning models. Persistent homology (PH), from the field of topological data analysis (TDA), demonstrates robustness and…

Computer Vision and Pattern Recognition · Computer Science 2025-06-05 Dashti A. Ali , Richard K. G. Do , William R. Jarnagin , Aras T. Asaad , Amber L. Simpson

We consider different notions of equivalence for Morse functions on the sphere in the context of persistent homology, and introduce new invariants to study these equivalence classes. These new invariants are as simple, but more discerning…

Stabilizer codes are a powerful method for implementing fault-tolerant quantum memory and in the case of topological codes, they form useful models for topological phases of matter. In this paper, we discuss the theory of stabilizer codes…

Quantum Physics · Physics 2019-10-02 Albert T. Schmitz

In multi-parameter persistence, the matching distance is defined as the supremum of weighted bottleneck distances on the barcodes given by the restriction of persistence modules to lines with a positive slope. In the case of finitely…

Computational Geometry · Computer Science 2023-12-06 Robyn Brooks , Celia Hacker , Claudia Landi , Barbara I. Mahler , Elizabeth R. Stephenson

In this paper, we consider topological featurizations of data defined over simplicial complexes, like images and labeled graphs, obtained by convolving this data with various filters before computing persistence. Viewing a convolution…

Algebraic Topology · Mathematics 2024-01-26 Elchanan Solomon , Paul Bendich

A topos theoretic generalisation of the category of sets allows for modelling spaces which vary according to time intervals. Persistent homology, or more generally, persistence is a central tool in topological data analysis, which examines…

Rings and Algebras · Mathematics 2015-06-23 João Pita Costa , Mikael Vejdemo Johansson , Primož Škraba

We construct "barcodes" for the chain complexes over Novikov rings that arise in Novikov's Morse theory for closed one-forms and in Floer theory on not-necessarily-monotone symplectic manifolds. In the case of classical Morse theory these…

Symplectic Geometry · Mathematics 2017-01-04 Michael Usher , Jun Zhang

Constrained coding plays a key role in optimizing performance and mitigating errors in applications such as storage and communication, where specific constraints on codewords are required. While non-parametric constraints have been…

Information Theory · Computer Science 2025-05-05 Daniella Bar-Lev , Michael Shlizerman

This paper introduces a novel approach to multi-parameter persistence using 2-categorical structures. We develop a framework that captures hierarchical interactions between filter parameters, overcoming fundamental limitations of…

Algebraic Topology · Mathematics 2025-08-06 Mauricio Angel

Motivated by the need to relate the biparameter persistence module induced by a pair of scalar functions with the monoparameter persistence modules induced by each function separately, we introduce a construction that defines a kind of…

Algebraic Topology · Mathematics 2026-01-30 Isabella Mastroianni , Marco Guerra , Ulderico Fugacci , Emanuela De Negri

In persistent homology analysis, interval modules play a central role in describing the birth and death of topological features across a filtration. In this work, we extend this setting, and propose the use of bipath persistent homology,…

Algebraic Topology · Mathematics 2024-04-04 Toshitaka Aoki , Emerson G. Escolar , Shunsuke Tada

We give a self-contained treatment of the theory of persistence modules indexed over the real line. We give new proofs of the standard results. Persistence diagrams are constructed using measure theory. Linear algebra lemmas are simplified…

Algebraic Topology · Mathematics 2013-03-21 Frederic Chazal , Vin de Silva , Marc Glisse , Steve Oudot

When working with (multi-parameter) persistence modules, one usually makes some type of tameness assumption in order to obtain better control over their algebraic behavior. One such notion is Ezra Millers notion of finite encodability,…

Algebraic Topology · Mathematics 2024-07-12 Lukas Waas

We discuss and review recent developments in the area of applied algebraic topology, such as persistent homology and barcodes. In particular, we discuss how these are related to understanding more about manifold learning from random point…

Probability · Mathematics 2015-03-13 Robert J. Adler , Omer Bobrowski , Matthew S. Borman , Eliran Subag , Shmuel Weinberger

Given a zigzag filtration, we want to find its barcode representatives, i.e., a compatible choice of bases for the homology groups that diagonalize the linear maps in the zigzag. To achieve this, we convert the input zigzag to a levelset…

Computational Geometry · Computer Science 2025-02-26 Tamal K. Dey , Tao Hou , Dmitriy Morozov
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