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We present an algorithm for the computation of Vietoris-Rips persistence barcodes and describe its implementation in the software Ripser. The method relies on implicit representations of the coboundary operator and the filtration order of…

Algebraic Topology · Mathematics 2021-06-28 Ulrich Bauer

The persistent homology pipeline includes the reduction of a, so-called, boundary matrix. We extend the work of Bauer et al. (2014) and Chen et al. (2011) where they show how to use dependencies in the boundary matrix to adapt the reduction…

Algebraic Topology · Mathematics 2017-08-17 Rodrigo Mendoza-Smith , Jared Tanner

We present an algorithm for computing the barcode of the image of a morphisms in persistent homology induced by an inclusion of filtered finite-dimensional chain complexes. These algorithms make use of the clearing optimization and can be…

Algebraic Topology · Mathematics 2022-01-13 Ulrich Bauer , Maximilian Schmahl

The computation of Vietoris-Rips persistence barcodes is both execution-intensive and memory-intensive. In this paper, we study its computational structure and identify several unique mathematical properties and algorithmic opportunities…

Computational Geometry · Computer Science 2026-03-30 Simon Zhang , Mengbai Xiao , Hao Wang

We revisit the problem of computing submatrices of the Cram\'er-Rao bound (CRB), which lower bounds the variance of any unbiased estimator of a vector parameter $\vth$. We explore iterative methods that avoid direct inversion of the Fisher…

Information Theory · Computer Science 2015-06-04 Paul Tune

Evaluating the performance of generative models in image synthesis is a challenging task. Although the Fr\'echet Inception Distance is a widely accepted evaluation metric, it integrates different aspects (e.g., fidelity and diversity) of…

Computer Vision and Pattern Recognition · Computer Science 2021-06-07 Ryoungwoo Jang , Minjee Kim , Da-in Eun , Kyungjin Cho , Jiyeon Seo , Namkug Kim

We propose a hybrid resampling method to approximate finitely supported Wasserstein barycenters on large-scale datasets, which can be combined with any exact solver. Nonasymptotic bounds on the expected error of the objective value as well…

Computation · Statistics 2021-05-28 Florian Heinemann , Axel Munk , Yoav Zemel

In this work, we study several variants of matrix reduction via Gaussian elimination that try to keep the reduced matrix sparse. The motivation comes from the growing field of topological data analysis where matrix reduction is the major…

Computational Geometry · Computer Science 2024-06-14 Ulrich Bauer , Talha Bin Masood , Barbara Giunti , Guillaume Houry , Michael Kerber , Abhishek Rathod

Matrix computations are a fundamental building-block of edge computing systems, with a major recent uptick in demand due to their use in AI/ML training and inference procedures. Existing approaches for distributing matrix computations…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-12 Anindya Bijoy Das , Aditya Ramamoorthy , David J. Love , Christopher G. Brinton

This paper analyzes the computational complexity of validated interval methods for uncertain nonlinear systems and steady-state enclosure. Interval analysis produces guaranteed enclosures that account for uncertainty and round-off, but its…

Data Structures and Algorithms · Computer Science 2026-05-13 Rudra Prakash , S. Janardhanan , Shaunak Sen

We give an algorithm with singly exponential complexity for computing the barcodes up to dimension $\ell$ (for any fixed $\ell \geq 0$) of the filtration of a given semi-algebraic set by the sub-level sets of a given polynomial. Our…

Algebraic Topology · Mathematics 2022-05-05 Saugata Basu , Negin Karisani

We introduce a new invariant defined on the vertices of a given filtered simplicial complex, called codensity, which controls the impact of removing vertices on persistent homology. We achieve this control through the use of an interleaving…

Algebraic Topology · Mathematics 2018-01-10 Facundo Mémoli , Osman Berat Okutan

The classical branch-and-bound algorithm for the integer feasibility problem has exponential worst case complexity. We prove that it is surprisingly efficient on reformulated problems, in which the columns of the constraint matrix are…

Optimization and Control · Mathematics 2009-08-06 Gabor Pataki , Mustafa Tural

Efficient decoding is crucial to high-throughput and power-sensitive wireless communication scenarios. A theoretical analysis of the performance-complexity tradeoff toward low-complexity decoding is required for a better understanding of…

Information Theory · Computer Science 2025-11-12 Qingqing Peng , Dawei Yin , Dongxu Chang , Yuan Li , Huazi Zhang , Guiying Yan , Guanghui Wang

In this paper q-ary Raptor codes under ML decoding are considered. An upper bound on the probability of decoding failure is derived using the weight enumerator of the outer code, or its expected weight enumerator if the outer code is drawn…

Information Theory · Computer Science 2016-11-21 Francisco Lázaro , Gianluigi Liva , Enrico Paolini , Gerhard Bauch

Multi-parameter persistent homology naturally arises in applications of persistent topology to data that come with extra information depending on additional parameters, like for example time series data. We introduce the concept of a…

Using a generating function approach, a computationally tractable expression is derived to predict the frame error rate arising at the output of the binary symmetric channel when a number of outer Reed--Solomon codes are concatenated with a…

Information Theory · Computer Science 2024-10-31 Alvin Y. Sukmadji , Frank R. Kschischang

Persistence diagrams play a fundamental role in Topological Data Analysis where they are used as topological descriptors of filtrations built on top of data. They consist in discrete multisets of points in the plane $\mathbb{R}^2$ that can…

Computational Geometry · Computer Science 2019-03-25 Frédéric Chazal , Vincent Divol

The long computational time and large memory requirements for computing Vietoris Rips persistent homology from point clouds remains a significant deterrent to its application to big data. This paper aims to reduce the memory footprint of…

Algebraic Topology · Mathematics 2024-12-12 Musashi Ayrton Koyama , Vanessa Robins , Katharine Turner

This paper presents prefix codes which minimize various criteria constructed as a convex combination of maximum codeword length and average codeword length or maximum redundancy and average redundancy, including a convex combination of the…

Information Theory · Computer Science 2011-02-11 Charalambos D. Charalambous , Themistoklis Charalambous , Farzad Rezaei
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