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Related papers: Polymers in Swarming Bacterial Turbulence

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The small scale statistics of homogeneous isotropic turbulence of dilute polymer solutions is investigated by means of direct numerical simulations of a simplified viscoelastic fluid model. It is found that polymers only partially suppress…

Chaotic Dynamics · Physics 2009-11-11 S. Berti , A. Bistagnino , G. Boffetta , A. Celani , S. Musacchio

We investigate numerically the dynamics of a single polymer in a linear shear flow. The effects of thermal fluctuations and randomly fluctuating velocity gradients are both analyzed. Angular, elongation and tumbling time statistics are…

Chaotic Dynamics · Physics 2009-11-11 A. Puliafito , K. Turitsyn

The correlations between the segments of a semidilute polymer solution are found to induce correlations in the positions of small particles added to the solution. Small means a diameter much less than the polymer's correlation length. In…

Soft Condensed Matter · Physics 2009-10-30 Richard P. Sear

We show that the recent experimental observation of the rectification of swimming bacteria in a system with an array of asymmetric barriers occurs due to the ballistic component of the bacteria trajectories introduced by the bacterial…

Soft Condensed Matter · Physics 2009-11-13 M. B. Wan , C. J. Olson Reichhardt , Z. Nussinov , C. Reichhardt

We use molecular dynamics simulations to investigate the tracer diffusion in a sea of polymers with specific binding zones for the tracer. These binding zones act as traps. Our simulations show that the tracer can undergo normal yet…

Soft Condensed Matter · Physics 2016-09-22 Nairhita Samanta , Rajarshi Chakrabarti

Many motile microorganisms react to environmental light cues with a variety of motility responses guiding cells towards better conditions for survival and growth. The use of spatial light modulators could help to elucidate the mechanisms of…

The diffusion of active microscopic organisms in complex environments plays an important role in a wide range of biological phenomena from cell colony growth to single organism transport. Here, we investigate theoretically and…

Fluid Dynamics · Physics 2018-01-16 Juan L. Aragones , Shahrzad Yazdi , Alfredo Alexander-Katz

Powdered materials of sizes ranging from nanometers to microns are widely used in materials science and are carefully selected to enhance the performance of a matrix. Fillers have been used in order to improve, among the others, mechanical,…

Soft Condensed Matter · Physics 2007-05-23 Andrea Corsi , P. D. Gujrati

The formation of (bio)molecular condensates via liquid-liquid phase separation in cells has received increasing attention, as these coacervates play important functional and regulatory roles within biological systems. However, the majority…

Soft Condensed Matter · Physics 2022-11-24 Arash Nikoubashman , Miho Yanagisawa

Microorganisms thrive in complex environments and their behavior in fluids holds significant importance for various medical and industrial applications. By conducting Lattice Boltzmann simulations, the transport and rotational properties of…

Soft Condensed Matter · Physics 2025-03-25 Yuan Zhou , Kai Qi , Marco De Corato , Kevin Stratford , Ignacio Pagonabarraga

We confine a dense suspension of motile \textit{Escherichia coli} inside a spherical droplet in a water-in-oil emulsion, creating a "bacterially" propelled droplet. We show that droplets move in a persistent random walk, with a persistence…

Soft Condensed Matter · Physics 2019-12-10 Gabriel Ramos , Maria Luisa Cordero , Rodrigo Soto

We study swimming of small spherical particles who regulate fluid flow on their surface by applying tangential squirming strokes. We derive translational and rotational velocities for any given stroke which is not restricted by axial…

Fluid Dynamics · Physics 2019-02-13 Itzhak Fouxon , Yizhar Or

We use a mesoscale simulation approach to explore the impact of different capsid geometries on the packaging and ejection dynamics of polymers of different flexibility. We find that both packing and ejection times are faster for flexible…

Soft Condensed Matter · Physics 2009-11-11 I. Ali , D. Marenduzzo , J. M. Yeomans

We develop a numerical framework to simulate the locomotion of a flagellated bacterium with a spheroidal head (such as Escherichia coli) in biological fluids like mucus, which are entangled polymer solutions exhibiting elasto-viscoplastic…

Fluid Dynamics · Physics 2026-04-01 Arjun Sharma , Sabarish V. Narayanan , Sarah Hormozi , Donald L. Koch

We investigated the Karman vortex behind a circular cylinder in a polymer solution by a molecular dynamics simulation. The vortex characteristics are distinctly different for short and long polymers. The solution with the long polymer…

Soft Condensed Matter · Physics 2018-04-13 Yuta Asano , Hiroshi Watanabe , Hiroshi Noguchi

In this letter we propose a kinematic model to show how collisions with a surface and rotational Brownian motion give rise to the accumulation of micro-swimmers near a surface. In this model, an elongated microswimmer invariably travels…

Biological Physics · Physics 2008-12-23 Guanglai Li , Jay X. Tang

The problem of one-dimensional randomly forced Burgers turbulence is considered in terms of (1+1) directed polymers. In the limit of strong turbulence (which corresponds to the zero temperature limit for the directed polymer system) using…

Statistical Mechanics · Physics 2018-09-26 Victor Dotsenko

Shear flow is known to induce huge density fluctuations in otherwise clear and uniform polymer solutions. This effect is rooted in the elasticity of the entangled polymer network, and can span distances over a thousand chains wide. It has…

Computational Physics · Physics 2018-08-21 Airidas Korolkovas

The interaction of polymers with small-scale velocity gradients can trigger a coil-stretch transition in the polymers. We analyze this transition within a direct numerical simulation of shear turbulence with an Oldroyd-B model for the…

Chaotic Dynamics · Physics 2009-11-07 Bruno Eckhardt , Jochen Kronjaeger , Joerg Schumacher

Although the motility of the flagellated bacteria, Escherichia coli, has been widely studied, the effect of viscosity on swimming speed remains controversial. The swimming mode of wild-type E.coli is often idealized as a "run-and- tumble"…

Biological Physics · Physics 2018-05-09 Zijie Qu , Fatma Zeynep Temel , Rene Henderikx , Kenneth S. Breuer