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Understanding how biological constraints shape neural computation is a central goal of computational neuroscience. Spatially embedded recurrent neural networks provide a promising avenue to study how modelled constraints shape the combined…

Neural and Evolutionary Computing · Computer Science 2024-09-27 Cornelia Sheeran , Andrew S. Ham , Duncan E. Astle , Jascha Achterberg , Danyal Akarca

Deep learning continues to play as a powerful state-of-art technique that has achieved extraordinary accuracy levels in various domains of regression and classification tasks, including images, video, signal, and natural language data. The…

Neural and Evolutionary Computing · Computer Science 2022-06-03 Anna Zou , Zhiyuan Li

In recent years, several studies have provided insight on the functioning of the brain which consists of neurons and form networks via interconnection among them by synapses. Neural networks are formed by interconnected systems of neurons,…

Neurons and Cognition · Quantitative Biology 2021-01-22 Martin C. Nwadiugwu

A key to deciphering the inner workings of neural networks is understanding what a model has learned. Promising methods for discovering learned features are based on analyzing activation values, whereby current techniques focus on analyzing…

Machine Learning · Computer Science 2022-06-23 Alex Bäuerle , Daniel Jönsson , Timo Ropinski

In this position paper, we promote the study of function spaces parameterized by machine learning models through the lens of algebraic geometry. To this end, we focus on algebraic models, such as neural networks with polynomial activations,…

Machine Learning · Computer Science 2025-06-03 Giovanni Luca Marchetti , Vahid Shahverdi , Stefano Mereta , Matthew Trager , Kathlén Kohn

Many scientific fields study data with an underlying structure that is a non-Euclidean space. Some examples include social networks in computational social sciences, sensor networks in communications, functional networks in brain imaging,…

Computer Vision and Pattern Recognition · Computer Science 2017-08-02 Michael M. Bronstein , Joan Bruna , Yann LeCun , Arthur Szlam , Pierre Vandergheynst

Despite advancements in artificial intelligence, object recognition models still lag behind in emulating visual information processing in human brains. Recent studies have highlighted the potential of using neural data to mimic brain…

Computer Vision and Pattern Recognition · Computer Science 2025-10-02 Zitong Lu , Yile Wang , Julie D. Golomb

Computational neuroscience relies on large-scale dynamical-systems models of neurons, with a vast amount of offline, pre-simulation, tuned parameters, with models often tied to their brain simulators. These fixed parameters lead to stiff…

Neurons and Cognition · Quantitative Biology 2025-12-25 Lennart P. L. Landsmeer , Mario Negrello , Said Hamdioui , Christos Strydis

Systematic relations between multiple objects that occur in various fields can be represented as networks. Real-world networks typically exhibit complex topologies whose structural properties are key factors in characterizing and further…

Physics and Society · Physics 2021-04-09 Yoshihisa Tanaka , Ryosuke Kojima , Shoichi Ishida , Fumiyoshi Yamashita , Yasushi Okuno

Recent advances in network science, applied to \textit{in vivo} brain recordings, have paved the way for better understanding of the structure and function of the brain. However, despite its obvious usefulness in neuroscience, traditional…

Neurons and Cognition · Quantitative Biology 2025-02-03 Vesna Vuksanovic

Single neurons in neural networks are often interpretable in that they represent individual, intuitively meaningful features. However, many neurons exhibit $\textit{mixed selectivity}$, i.e., they represent multiple unrelated features. A…

Machine Learning · Statistics 2023-10-19 David Klindt , Sophia Sanborn , Francisco Acosta , Frédéric Poitevin , Nina Miolane

This paper introduces a new neural network model that aims to mimic the biological brain more closely by structuring the network as a complete directed graph that processes continuous data for each timestep. Current neural networks have…

Neural and Evolutionary Computing · Computer Science 2024-01-10 Frank Li

Incorporating inductive biases into ML models is an active area of ML research, especially when ML models are applied to data about the physical world. Equivariant Graph Neural Networks (GNNs) have recently become a popular method for…

Machine Learning · Computer Science 2023-11-07 Savannah Thais , Daniel Murnane

With the widespread use of information technologies, information networks are becoming increasingly popular to capture complex relationships across various disciplines, such as social networks, citation networks, telecommunication networks,…

Social and Information Networks · Computer Science 2018-07-20 Daokun Zhang , Jie Yin , Xingquan Zhu , Chengqi Zhang

The mouse is one of the most studied animal models in the field of systems neuroscience. Understanding the generalized patterns and decoding the neural representations that are evoked by the diverse range of natural scene stimuli in the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-13 Ahmed Qazi , Hamd Jalil , Asim Iqbal

To make progress in science, we often build abstract representations of physical systems that meaningfully encode information about the systems. The representations learnt by most current machine learning techniques reflect statistical…

Artificial neural networks are being proposed as models of parts of the brain. The networks are compared to recordings of biological neurons, and good performance in reproducing neural responses is considered to support the model's…

Neurons and Cognition · Quantitative Biology 2023-09-01 Yena Han , Tomaso Poggio , Brian Cheung

Many algorithms and observed phenomena in deep learning appear to be affected by parameter symmetries -- transformations of neural network parameters that do not change the underlying neural network function. These include linear mode…

Machine Learning · Computer Science 2024-10-16 Derek Lim , Theo Moe Putterman , Robin Walters , Haggai Maron , Stefanie Jegelka

This paper investigates contextual word representation models from the lens of similarity analysis. Given a collection of trained models, we measure the similarity of their internal representations and attention. Critically, these models…

Computation and Language · Computer Science 2020-05-05 John M. Wu , Yonatan Belinkov , Hassan Sajjad , Nadir Durrani , Fahim Dalvi , James Glass

Understanding the black-box representations in Deep Neural Networks (DNN) is an essential problem in deep learning. In this work, we propose Graph-Based Similarity (GBS) to measure the similarity of layer features. Contrary to previous…

Machine Learning · Computer Science 2022-05-26 Zuohui Chen , Yao Lu , Jinxuan Hu , Wen Yang , Qi Xuan , Zhen Wang , Xiaoniu Yang