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Cellular Electron Cryo-Tomography (CECT) is a powerful imaging technique for the 3D visualization of cellular structure and organization at submolecular resolution. It enables analyzing the native structures of macromolecular complexes and…

Quantitative Methods · Quantitative Biology 2018-05-16 Chang Liu , Xiangrui Zeng , Ruogu Lin , Xiaodan Liang , Zachary Freyberg , Eric Xing , Min Xu

We describe the concept and procedure of drifted-charge extraction developed in the MicroBooNE experiment, a single-phase liquid argon time projection chamber (LArTPC). This technique converts the raw digitized TPC waveform to the number of…

Instrumentation and Detectors · Physics 2023-02-17 MicroBooNE collaboration , C. Adams , R. An , J. Anthony , J. Asaadi , M. Auger , L. Bagby , S. Balasubramanian , B. Baller , C. Barnes , G. Barr , M. Bass , F. Bay , A. Bhat , K. Bhattacharya , M. Bishai , A. Blake , T. Bolton , L. Camilleri , D. Caratelli , R. Castillo Fernandez , F. Cavanna , G. Cerati , H. Chen , Y. Chen , E. Church , D. Cianci , E. Cohen , G. H. Collin , J. M. Conrad , M. Convery , L. Cooper-Troendle , J. I. Crespo-Anadon , M. Del Tutto , D. Devitt , A. Diaz , S. Dytman , B. Eberly , A. Ereditato , L. Escudero Sanchez , J. Esquivel , J. J. Evans , A. A. Fadeeva , B. T. Fleming , W. Foreman , A. P. Furmanski , D. Garcia-Gamez , G. T. Garvey , V. Genty , D. Goeldi , S. Gollapinni , E. Gramellini , H. Greenlee , R. Grosso , R. Guenette , P. Guzowski , A. Hackenburg , P. Hamilton , O. Hen , V Hewes , C. Hill , J. Ho , G. A. Horton-Smith , A. Hourlier , E. -C. Huang , C. James , J. Jan de Vries , L. Jiang , R. A. Johnson , J. Joshi , H. Jostlein , Y. -J. Jwa , D. Kaleko , G. Karagiorgi , W. Ketchum , B. Kirby , M. Kirby , T. Kobilarcik , I. Kreslo , Y. Li , A. Lister , B. R. Littlejohn , S. Lockwitz , D. Lorca , W. C. Louis , M. Luethi , B. Lundberg , X. Luo , A. Marchionni , S. Marcocci , C. Mariani , J. Marshall , D. A. Martinez Caicedo , A. Mastbaum , V. Meddage , T. Miceli , G. B. Mills , A. Mogan , J. Moon , M. Mooney , C. D. Moore , J. Mousseau , M. Murphy , R. Murrells , D. Naples , P. Nienaber , J. Nowak , O. Palamara , V. Pandey , V. Paolone , A. Papadopoulou , V. Papavassiliou , S. F. Pate , Z. Pavlovic , E. Piasetzky , D. Porzio , G. Pulliam , X. Qian , J. L. Raaf , V. Radeka , A. Rafique , L. Rochester , M. Ross-Lonergan , C. Rudolf von Rohr , B. Russell , D. W. Schmitz , A. Schukraft , W. Seligman , M. H. Shaevitz , J. Sinclair , A. Smith , E. L. Snider , M. Soderberg , S. Soldner-Rembold , S. R. Soleti , P. Spentzouris , J. Spitz , J. St. John , T. Strauss , K. Sutton , S. Sword-Fehlberg , A. M. Szelc , N. Tagg , W. Tang , K. Terao , M. Thomson , C. Thorn , M. Toups , Y. -T. Tsai , S. Tufanli , T. Usher , W. Van De Pontseele , R. G. Van de Water , B. Viren , M. Weber , H. Wei , D. A. Wickremasinghe , K. Wierman , Z. Williams , S. Wolbers , T. Wongjirad , K. Woodruff , T. Yang , G. Yarbrough , L. E. Yates , B. Yu , G. P. Zeller , J. Zennamo , C. Zhang

The forthcoming Hyper-Kamiokande experiment requires substantially larger Monte Carlo datasets than previous experiments to satisfy stringent systematic-uncertainty requirements. While traditional maximum-likelihood reconstruction provides…

High Energy Physics - Experiment · Physics 2026-04-16 Andrew Atta , Nick Prouse , Shuoyu Chen , Kimihiro Okumura , Patrick de Perio , Eric Thrane , Phillip Urquijo

The MicroBooNE experiment is designed to observe interactions of neutrinos with a Liquid Argon Time Projection Chamber (LArTPC) detector from the on-axis Booster Neutrino Beam (BNB) and off-axis Neutrinos at the Main Injector (NuMI) beam at…

Instrumentation and Detectors · Physics 2015-11-03 Jyoti Joshi , Xin Qian

We present the performance of a semantic segmentation network, SparseSSNet, that provides pixel-level classification of MicroBooNE data. The MicroBooNE experiment employs a liquid argon time projection chamber for the study of neutrino…

Instrumentation and Detectors · Physics 2021-04-07 MicroBooNE collaboration , P. Abratenko , M. Alrashed , R. An , J. Anthony , J. Asaadi , A. Ashkenazi , S. Balasubramanian , B. Baller , C. Barnes , G. Barr , V. Basque , L. Bathe-Peters , O. Benevides Rodrigues , S. Berkman , A. Bhanderi , A. Bhat , M. Bishai , A. Blake , T. Bolton , L. Camilleri , D. Caratelli , I. Caro Terrazas , R. Castillo Fernandez , F. Cavanna , G. Cerati , Y. Chen , E. Church , D. Cianci , J. M. Conrad , M. Convery , L. Cooper-Troendle , J. I. Crespo-Anadon , M. Del Tutto , S. R. Dennis , D. Devitt , R. Diurba , R. Dorrill , K. Duffy , S. Dytman , B. Eberly , A. Ereditato , J. J. Evans , G. A. Fiorentini Aguirre , R. S. Fitzpatrick , B. T. Fleming , N. Foppiani , D. Franco , A. P. Furmanski , D. Garcia-Gamez , S. Gardiner , G. Ge , S. Gollapinni , O. Goodwin , E. Gramellini , P. Green , H. Greenlee , W. Gu , R. Guenette , P. Guzowski , L. Hagaman , E. Hall , P. Hamilton , O. Hen , G. A. Horton-Smith , A. Hourlier , R. Itay , C. James , J. Jan de Vries , X. Ji , L. Jiang , J. H. Jo , R. A. Johnson , Y. J. Jwa , N. Kamp , N. Kaneshige , G. Karagiorgi , W. Ketchum , B. Kirby , M. Kirby , T. Kobilarcik , I. Kreslo , R. LaZur , I. Lepetic , K. Li , Y. Li , B. R. Littlejohn , W. C. Louis , X. Luo , A. Marchionni , C. Mariani , D. Marsden , J. Marshall , J. Martin-Albo , D. A. Martinez Caicedo , K. Mason , A. Mastbaum , N. McConkey , V. Meddage , T. Mettler , K. Miller , J. Mills , K. Mistry , T. Mohayai , A. Mogan , J. Moon , M. Mooney , A. F. Moor , C. D. Moore , L. Mora Lepin , J. Mousseau , M. Murphy , D. Naples , A. Navrer-Agasson , R. K. Neely , P. Nienaber , J. Nowak , O. Palamara , V. Paolone , A. Papadopoulou , V. Papavassiliou , S. F. Pate , A. Paudel , Z. Pavlovic , E. Piasetzky , I. Ponce-Pinto , S. Prince , X. Qian , J. L. Raaf , V. Radeka , A. Rafique , M. Reggiani-Guzzo , L. Ren , L. Rochester , J. Rodriguez Rondon , H. E. Rogers , M. Rosenberg , M. Ross-Lonergan , B. Russell , G. Scanavini , D. W. Schmitz , A. Schukraft , W. Seligman , M. H. Shaevitz , R. Sharankova , J. Sinclair , A. Smith , E. L. Snider , M. Soderberg , S. Soldner-Rembold , S. R. Soleti , P. Spentzouris , J. Spitz , M. Stancari , J. St. John , T. Strauss , K. Sutton , S. Sword-Fehlberg , A. M. Szelc , N. Tagg , W. Tang , K. Terao , C. Thorpe , M. Toups , Y. -T. Tsai , M. A. Uchida , T. Usher , W. Van De Pontseele , B. Viren , M. Weber , H. Wei , Z. Williams , S. Wolbers , T. Wongjirad , M. Wospakrik , W. Wu , E. Yandel , T. Yang , G. Yarbrough , L. E. Yates , G. P. Zeller , J. Zennamo , C. Zhang

Low-power computer vision on embedded devices has many applications. This paper describes a low-power technique for the object re-identification (reID) problem: matching a query image against a gallery of previously seen images.…

Computer Vision and Pattern Recognition · Computer Science 2021-06-22 Abhinav Goel , Caleb Tung , Xiao Hu , Haobo Wang , James C. Davis , George K. Thiruvathukal , Yung-Hsiang Lu

Accurate reconstruction of recoil-electron directions is critical for enhancing the point-spread function of electron-tracking Compton cameras (ETCCs) in gamma-ray imaging. Although full three-dimensional (3D) readout systems achieve…

Instrumentation and Detectors · Physics 2026-04-22 Tomonori Ikeda , Tatsuya Sawano , Naomi Tsuji , Yoshitaka Mizumura

Optical photons are used as signal in a wide variety of particle detectors. Modern neutrino experiments employ hundreds to tens of thousands of photon detectors to observe signal from millions to billions of scintillation photons produced…

One of the far detectors of the Deep Underground Neutrino Experiment (DUNE) will be instrumented with a Vertical Drift Liquid Argon Time Projection Chamber (VD LArTPC). It will also be equipped with a Photo-Detection System (PDS), which…

High Energy Physics - Experiment · Physics 2024-12-16 Sabrina Sacerdoti

The liquid argon time projection chamber (LArTPC) detector technology has an excellent capability to measure properties of low-energy neutrinos produced by the sun and supernovae and to look for exotic physics at very low energies. In order…

Cryo-electron microscopy (cryo-EM), the subject of the 2017 Nobel Prize in Chemistry, is a technology for determining the 3-D structure of macromolecules from many noisy 2-D projections of instances of these macromolecules, whose…

Computer Vision and Pattern Recognition · Computer Science 2020-04-22 Roy R. Lederman , Joakim Andén , Amit Singer

The complex events observed at the NOvA long-baseline neutrino oscillation experiment contain vital information for understanding the most elusive particles in the standard model. The NOvA detectors observe interactions of neutrinos from…

Machine Learning · Computer Science 2023-03-14 Alexander Shmakov , Alejandro Yankelevich , Jianming Bian , Pierre Baldi

Online reconstruction is key for monitoring purposes and real time analysis in High Energy and Nuclear Physics experiments. A necessary component of reconstruction algorithms is particle identification that combines information left by a…

Instrumentation and Detectors · Physics 2026-01-13 Richard Tyson , Gagik Gavalian

Neutrons are important final-state particles in neutrino interactions, yet they are not considered or reconstructed in most current neutrino LArTPC physics analyses. In this paper, we present a simulation-based proof-of-concept study of…

High Energy Physics - Experiment · Physics 2026-04-14 Miguel Hernandez Morquecho , Bryce Littlejohn , Paola Sala , Linyan Wan

The KM3NeT research infrastructure is currently under construction at two locations in the Mediterranean Sea. The KM3NeT/ORCA water-Cherenkov neutrino detector off the French coast will instrument several megatons of seawater with…

Instrumentation and Methods for Astrophysics · Physics 2020-10-13 Sebastiano Aiello , Arnauld Albert , Sergio Alves Garre , Zineb Aly , Fabrizio Ameli , Michel Andre , Giorgos Androulakis , Marco Anghinolfi , Mancia Anguita , Gisela Anton , Miquel Ardid , Julien Aublin , Christos Bagatelas , Giancarlo Barbarino , Bruny Baret , Suzan Basegmez du Pree , Meriem Bendahman , Edward Berbee , Vincent Bertin , Simone Biagi , Andrea Biagioni , Matthias Bissinger , Markus Boettcher , Jihad Boumaaza , Mohammed Bouta , Mieke Bouwhuis , Cristiano Bozza , Horea Branzas , Ronald Bruijn , Jürgen Brunner , Ernst-Jan Buis , Raffaele Buompane , Jose Busto , Barbara Caiffi , David Calvo , Antonio Capone , Víctor Carretero , Paolo Castaldi , Silvia Celli , Mohamed Chabab , Nhan Chau , Andrew Chen , Silvio Cherubini , Vitaliano Chiarella , Tommaso Chiarusi , Marco Circella , Rosanna Cocimano , Joao Coelho , Alexis Coleiro , Marta Colomer Molla , Rosa Coniglione , Paschal Coyle , Alexandre Creusot , Giacomo Cuttone , Antonio D'Onofrio , Richard Dallier , Maarten de Jong , Paul de Jong , Mauro De Palma , Gwenhaël de Wasseige , Els de Wolf , Irene Di Palma , Antonio Diaz , Dídac Diego-Tortosa , Carla Distefano , Alba Domi , Roberto Donà , Corinne Donzaud , Damien Dornic , Manuel Dörr , Doriane Drouhin , Thomas Eberl , Imad El Bojaddaini , Dominik Elsaesser , Alexander Enzenhöfer , Paolo Fermani , Giovanna Ferrara , Miroslav Filipovic , Francesco Filippini , Luigi Antonio Fusco , Omar Gabella , Tamas Gal , Alfonso Andres Garcia Soto , Fabio Garufi , Yoann Gatelet , Nicole Geißelbrecht , Lucio Gialanella , Emidio Giorgio , Sara Rebecca Gozzini , Rodrigo Gracia , Kay Graf , Dario Grasso , Giuseppe Grella , Carlo Guidi , Steffen Hallmann , Hassane Hamdaoui , Aart Heijboer , Amar Hekalo , Juan-Jose Hernandez-Rey , Jannik Hofestädt , Feifei Huang , Walid Idrissi Ibnsalih , Giulia Illuminati , Clancy James , Bouke Jisse Jung , Matthias Kadler , Piotr Kalaczyński , Oleg Kalekin , Uli Katz , Nafis Rezwan Khan Chowdhury , Giorgi Kistauri , Els Koffeman , Paul Kooijman , Antoine Kouchner , Michael Kreter , Vladimir Kulikovskiy , Robert Lahmann , Giuseppina Larosa , Remy Le Breton , Ornella Leonardi , Francesco Leone , Emanuele Leonora , Giuseppe Levi , Massimiliano Lincetto , Miles Lindsey Clark , Thomas Lipreau , Alessandro Lonardo , Fabio Longhitano , Daniel Lopez Coto , Lukas Maderer , Jerzy Mańczak , Karl Mannheim , Annarita Margiotta , Antonio Marinelli , Christos Markou , Lilian Martin , Juan Antonio Martínez-Mora , Agnese Martini , Fabio Marzaioli , Stefano Mastroianni , Safaa Mazzou , Karel Melis , Gennaro Miele , Pasquale Migliozzi , Emilio Migneco , Piotr Mijakowski , Luis Salvador Miranda Palacios , Carlos Maximiliano Mollo , Mauro Morganti , Michael Moser , Abdelilah Moussa , Rasa Muller , Mario Musumeci , Lodewijk Nauta , Sergio Navas , Carlo Alessandro Nicolau , Brían Ó Fearraigh , Mukharbek Organokov , Angelo Orlando , Gogita Papalashvili , Riccardo Papaleo , Cosimo Pastore , Alice Paun , Gabriela Emilia Pavalas , Carmelo Pellegrino , Mathieu Perrin-Terrin , Paolo Piattelli , Camiel Pieterse , Konstantinos Pikounis , Ofelia Pisanti , Chiara Poirè , Vlad Popa , Maarten Post , Thierry Pradier , Gerd Pühlhofer , Sara Pulvirenti , Omphile Rabyang , Fabrizio Raffaelli , Nunzio Randazzo , Antonio Rapicavoli , Soebur Razzaque , Diego Real , Stefan Reck , Giorgio Riccobene , Marc Richer , Stephane Rivoire , Alberto Rovelli , Francisco Salesa Greus , Dorothea Franziska Elisabeth Samtleben , Agustín Sánchez Losa , Matteo Sanguineti , Andrea Santangelo , Domenico Santonocito , Piera Sapienza , Jutta Schnabel , Jordan Seneca , Irene Sgura , Rezo Shanidze , Ankur Sharma , Francesco Simeone , Anna Sinopoulou , Bernardino Spisso , Maurizio Spurio , Dimitris Stavropoulos , Jos Steijger , Simona Maria Stellacci , Mauro Taiuti , Yahya Tayalati , Enrique Tenllado , Tarak Thakore , Steven Tingay , Ekaterini Tzamariudaki , Dimitrios Tzanetatos , Ad van den Berg , Frits van der Knaap , Daan van Eijk , Véronique Van Elewyck , Hans van Haren , Godefroy Vannoye , George Vasileiadis , Federico Versari , Salvatore Viola , Daniele Vivolo , Joern Wilms , Rafał Wojaczyński , Dmitry Zaborov , Sandra Zavatarelli , Angela Zegarelli , Daniele Zito , Juan-de-Dios Zornoza , Juan Zúñiga , Natalia Zywucka

Automatic cell tracking in dense environments is plagued by inaccurate correspondences and misidentification of parent-offspring relationships. In this paper, we introduce a novel cell tracking algorithm named DenseTrack, which integrates…

Image and Video Processing · Electrical Eng. & Systems 2024-07-08 Tanjin Taher Toma , Yibo Wang , Andreas Gahlmann , Scott T. Acton

The accurate characterisation of the 3D deformations of slender fibres and thin sheets in flow, is a key experimental challenge in the study of particle-laden flows. We propose a high-resolution, single-camera method to visualise…

Fluid Dynamics · Physics 2026-03-18 Tymoteusz Miara , Draga Pihler-Puzović , Matthias Heil , Anne Juel

Phase retrieval, the problem of recovering lost phase information from measured intensity alone, is an inverse problem that is widely faced in various imaging modalities ranging from astronomy to nanoscale imaging. The current process of…

Image and Video Processing · Electrical Eng. & Systems 2024-06-12 Henry Chan , Youssef S. G. Nashed , Saugat Kandel , Stephan Hruszkewycz , Subramanian Sankaranarayanan , Ross J. Harder , Mathew J. Cherukara

We propose Beam Tree Recursive Cell (BT-Cell) - a backpropagation-friendly framework to extend Recursive Neural Networks (RvNNs) with beam search for latent structure induction. We further extend this framework by proposing a relaxation of…

Machine Learning · Computer Science 2023-06-21 Jishnu Ray Chowdhury , Cornelia Caragea

We introduce a method to classify imagery using a convo- lutional neural network (CNN) on multi-view image pro- jections. The power of our method comes from using pro- jections of multiple images at multiple depth planes near the…

Computer Vision and Pattern Recognition · Computer Science 2017-12-27 Dror Aiger , Brett Allen , Aleksey Golovinskiy