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The role of species interactions in controlling the interplay between the stability of an ecosystem and its biodiversity is still not well understood. The ability of ecological communities to recover after a small perturbation of the…

Populations and Evolution · Quantitative Biology 2016-06-15 Jacopo Grilli , Matteo Adorisio , Samir Suweis , György Barabás , Jayanth R. Banavar , Stefano Allesina , Amos Maritan

In the past decade, cities have experienced rapid growth, expansion, and changes in their community structure. Many aspects of critical urban infrastructure are closely coupled with the human communities that they serve. Urban communities…

Social and Information Networks · Computer Science 2018-12-12 Weisi Guo , Guillem Mosquera Donate , Stephen Law , Samuel Johnson , Maria Liakata , Alan Wilson

Group formation and coordination are fundamental characteristics of living systems, essential for performing tasks and ensuring survival. Interactions between individuals play a key role in group formation, and the impact of resource…

A central concern of community ecology is the interdependence between interaction strengths and the underlying structure of the network upon which species interact. In this work we present a solvable example of such a feedback mechanism in…

Populations and Evolution · Quantitative Biology 2024-04-15 Lyle Poley , Tobias Galla , Joseph W. Baron

Empirical observations show that ecological communities can have a huge number of coexisting species, also with few or limited number of resources. These ecosystems are characterized by multiple type of interactions, in particular…

Populations and Evolution · Quantitative Biology 2018-05-18 Chengyi Tu , Samir Suweis , Jacopo Grillib , Marco Formentin , Amos Maritan

Empirical observations show that ecological communities can have a huge number of coexisting species, also with few or limited number of resources. These ecosystems are characterized by multiple type of interactions, in particular…

Populations and Evolution · Quantitative Biology 2018-05-21 Chengyi Tu , Samir Suweis , Jacopo Grilli , Marco Formentin , Amos Maritan

The environment has a strong influence on a population's evolutionary dynamics. Driven by both intrinsic and external factors, the environment is subject to continual change in nature. To capture an ever-changing environment, we consider a…

Populations and Evolution · Quantitative Biology 2022-02-18 Qi Su , Alex McAvoy , Long Wang , Martin A. Nowak

Mutualistic networks are formed when the interactions between two classes of species are mutually beneficial. They are important examples of cooperation shaped by evolution. Mutualism between animals and plants plays a key role in the…

Populations and Evolution · Quantitative Biology 2013-08-23 Samir Suweis , Filippo Simini , Jayanth R. Banavar , Amos Maritan

The emergence of collective cooperation in competitive environments is a well-known phenomenon in biology, economics, and social systems. While most evolutionary game models focus on the evolution of strategies for a fixed game, how…

Physics and Society · Physics 2024-08-01 Onkar Sadekar , Andrea Civilini , Jesús Gómez-Gardeñes , Vito Latora , Federico Battiston

Microbiome-based stratification of healthy individuals into compositional categories, referred to as "community types", holds promise for drastically improving personalized medicine. Despite this potential, the existence of community types…

Quantitative Methods · Quantitative Biology 2016-04-27 Travis E. Gibson , Amir Bashan , Hong-Tai Cao , Scott T. Weiss , Yang-Yu Liu

Elucidating the mechanisms that lead to cooperation is still one of the main scientific challenges of current times, as many common cooperative scenarios remain elusive and at odds with Darwin's natural selection theory. Here, we study…

Physics and Society · Physics 2021-07-14 H. Guo , D. Jia , I. Sendiña-Nadal , M. Zhang , Z. Wang , X. Li , K. Alfaro-Bittner , Y. Moreno , S. Boccaletti

An organism that is newly introduced into an existing population has a survival probability that is dependent on both the population density of its environment and the competition it experiences with the members of that population.…

Populations and Evolution · Quantitative Biology 2024-12-17 Jason M. Gray , Rowan J. Barker-Clarke , Jacob G. Scott , Michael Hinczewski

People tend to have their social interactions with members of their own community. Such group-structured interactions can have a profound impact on the behaviors that evolve. Group structure affects the way people cooperate, and how they…

Populations and Evolution · Quantitative Biology 2022-11-09 Yohsuke Murase , Christian Hilbe , Seung Ki Baek

We consider a model for a population in a heterogeneous environment, with logistic type local population dynamics, under the assumption that individuals can switch between two different nonzero rates of diffusion. Such switching behavior…

Analysis of PDEs · Mathematics 2020-01-14 Robert Stephen Cantrell , Chris Cosner , Xiao Yu

Species-rich communities, such as the microbiota or microbial ecosystems, provide key functions for human health and climatic resilience. Increasing effort is being dedicated to design experimental protocols for selecting community-level…

Populations and Evolution · Quantitative Biology 2023-06-22 Jules Fraboul , Giulio Biroli , Silvia De Monte

Cooperation plays a fundamental role in societal and biological domains, and the population structure profoundly shapes the dynamics of evolution. Practically, individuals behave either altruistically or egoistically in multiple groups,…

Adaptation and Self-Organizing Systems · Physics 2024-04-05 Dini Wang , Peng Yi , Yiguang Hong , Jie Chen , Gang Yan

In a range of scientific coauthorship networks, transitions emerge in degree distributions, correlations between degrees and local clustering coefficients, etc. The existence of those transitions could be regarded as a result of the…

Physics and Society · Physics 2018-06-19 Zheng Xie , Enming Dong , Dongyun Yi , Ouyang Zhenzheng , Jianping Li

Cooperation is fundamental to the functioning of biological and social systems in both human and animal populations, with the structure of interactions playing a crucial role. Previous studies have used networks to describe interactions and…

Physics and Society · Physics 2025-09-24 Dhruv Mittal , Flávio L. Pinheiro , Vítor V. Vasconcelos

Individuals interact and cooperate in structured systems. Many studies represent this structure using static networks, where each link represents a permanent connection between two nodes. However, real interactions are generally not…

Physics and Society · Physics 2025-12-23 Xiaochen Wang , Lei Zhou , Alex McAvoy , Zhenglong Tian , Aming Li

We investigate the replicator dynamics with "sparse" symmetric interactions which represent specialist-specialist interactions in ecological communities. By considering a large self interaction $u$, we conduct a perturbative expansion which…

Populations and Evolution · Quantitative Biology 2016-09-21 Tomoyuki Obuchi , Yoshiyuki Kabashima , Kei Tokita