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Protein structure prediction helps to understand gene translation and protein function, which is of growing interest and importance in structural biology. The AlphaFold model, which used transformer architecture to achieve atomic-level…

Machine Learning · Computer Science 2023-02-07 Shenggan Cheng , Xuanlei Zhao , Guangyang Lu , Jiarui Fang , Zhongming Yu , Tian Zheng , Ruidong Wu , Xiwen Zhang , Jian Peng , Yang You

In recent years, deep neural networks (DNN) have demonstrated significant business impact in large scale analysis and classification tasks such as speech recognition, visual object detection, pattern extraction, etc. Training of large DNNs,…

Machine Learning · Computer Science 2017-05-24 Tayfun Gokmen , Yurii Vlasov

Graph Neural Networks (GNNs) are powerful and flexible neural networks that use the naturally sparse connectivity information of the data. GNNs represent this connectivity as sparse matrices, which have lower arithmetic intensity and thus…

Machine Learning · Computer Science 2020-09-04 Alok Tripathy , Katherine Yelick , Aydin Buluc

Efficiently scaling deep neural networks across GPU clusters requires navigating complex trade-offs between computational throughput, memory utilization, and synchronization overhead. This paper presents a unified empirical evaluation of…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-06 Md Sultanul Islam Ovi

Many real world graphs contain time domain information. Temporal Graph Neural Networks capture temporal information as well as structural and contextual information in the generated dynamic node embeddings. Researchers have shown that these…

Machine Learning · Computer Science 2022-07-04 Hongkuan Zhou , Da Zheng , Israt Nisa , Vasileios Ioannidis , Xiang Song , George Karypis

The advent of the Transformer architecture has propelled the growth of natural language processing (NLP) models, leading to remarkable achievements in numerous NLP tasks. Yet, the absence of specialized hardware like expansive GPU memory…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-03-18 Xiaofeng Wu , Jia Rao , Wei Chen

Communication is a key bottleneck for distributed graph neural network (GNN) training. This paper proposes GNNPipe, a new approach that scales the distributed full-graph deep GNN training. Being the first to use layer-level model…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-09-26 Jingji Chen , Zhuoming Chen , Xuehai Qian

Deep Q-Network (DQN) marked a major milestone for reinforcement learning, demonstrating for the first time that human-level control policies could be learned directly from raw visual inputs via reward maximization. Even years after its…

Machine Learning · Computer Science 2021-11-03 Brett Daley , Christopher Amato

To train modern large DNN models, pipeline parallelism has recently emerged, which distributes the model across GPUs and enables different devices to process different microbatches in pipeline. Earlier pipeline designs allow multiple…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-23 Ziyue Luo , Xiaodong Yi , Guoping Long , Shiqing Fan , Chuan Wu , Jun Yang , Wei Lin

Deep neural networks have yielded superior performance in many applications; however, the gradient computation in a deep model with millions of instances lead to a lengthy training process even with modern GPU/TPU hardware acceleration. In…

Machine Learning · Computer Science 2019-05-10 Jiong Zhang , Hsiang-fu Yu , Inderjit S. Dhillon

Graph Neural Networks (GNNs) are widely used today in recommendation systems, fraud detection, and node/link classification tasks. Real world GNNs continue to scale in size and require a large memory footprint for storing graphs and…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-03-31 Jeongmin Brian Park , Kun Wu , Vikram Sharma Mailthody , Zaid Quresh , Scott Mahlke , Wen-mei Hwu

Graph Neural Networks (GNNs) are powerful tools for learning graph-structured data, but their scalability is hindered by inefficient mini-batch generation, data transfer bottlenecks, and costly inter-GPU synchronization. Existing training…

Machine Learning · Computer Science 2026-01-09 Irfan Ullah , Young-Koo Lee

When executing a deep neural network (DNN), its model parameters are loaded into GPU memory before execution, incurring a significant GPU memory burden. There are studies that reduce GPU memory usage by exploiting CPU memory as a swap…

Machine Learning · Computer Science 2022-10-11 Mingoo Ji , Saehanseul Yi , Changjin Koo , Sol Ahn , Dongjoo Seo , Nikil Dutt , Jong-Chan Kim

We present Synkhronos, an extension to Theano for multi-GPU computations leveraging data parallelism. Our framework provides automated execution and synchronization across devices, allowing users to continue to write serial programs without…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-10-13 Adam Stooke , Pieter Abbeel

Fully Connected Neural Network (FCNN) is a class of Artificial Neural Networks widely used in computer science and engineering, whereas the training process can take a long time with large datasets in existing many-core systems. Optical…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-11-29 Fei Dai , Yawen Chen , Haibo Zhang , Zhiyi Huang

Porting state of the art deep learning algorithms to resource constrained compute platforms (e.g. VR, AR, wearables) is extremely challenging. We propose a fast, compact, and accurate model for convolutional neural networks that enables…

Computer Vision and Pattern Recognition · Computer Science 2017-06-14 Hessam Bagherinezhad , Mohammad Rastegari , Ali Farhadi

Deep neural networks (DNN) have shown superior performance in a variety of tasks. As they rapidly evolve, their escalating computation and memory demands make it challenging to deploy them on resource-constrained edge devices. Though…

Machine Learning · Computer Science 2021-09-07 Jiaqi Gu , Hanqing Zhu , Chenghao Feng , Mingjie Liu , Zixuan Jiang , Ray T. Chen , David Z. Pan

Transformer models have achieved state-of-the-art performance on various domains of applications and gradually becomes the foundations of the advanced large deep learning (DL) models. However, how to train these models over multiple GPUs…

Machine Learning · Computer Science 2022-11-28 Xupeng Miao , Yujie Wang , Youhe Jiang , Chunan Shi , Xiaonan Nie , Hailin Zhang , Bin Cui

Memory replay based techniques have shown great success for continual learning with incrementally accumulated Euclidean data. Directly applying them to continually expanding networks, however, leads to the potential memory explosion problem…

Machine Learning · Computer Science 2024-07-02 Xikun Zhang , Dongjin Song , Yixin Chen , Dacheng Tao

We introduce a learning-based framework to optimize tensor programs for deep learning workloads. Efficient implementations of tensor operators, such as matrix multiplication and high dimensional convolution, are key enablers of effective…

Machine Learning · Computer Science 2019-01-10 Tianqi Chen , Lianmin Zheng , Eddie Yan , Ziheng Jiang , Thierry Moreau , Luis Ceze , Carlos Guestrin , Arvind Krishnamurthy
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