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Python has become the de-facto language for training deep neural networks, coupling a large suite of scientific computing libraries with efficient libraries for tensor computation such as PyTorch or TensorFlow. However, when models are used…

Machine Learning · Computer Science 2021-04-02 Zachary DeVito , Jason Ansel , Will Constable , Michael Suo , Ailing Zhang , Kim Hazelwood

This paper presents the first results from a model for chemical evolution that can be applied to N-body cosmological simulations and quantitatively compared to measured stellar abundances from large astronomical surveys. This model…

Astrophysics of Galaxies · Physics 2015-09-29 Brian D. Crosby , Brian W. O'Shea , Timothy C. Beers , Jason Tumlinson

Clustering mixtures of Gaussian distributions is a fundamental and challenging problem that is ubiquitous in various high-dimensional data processing tasks. While state-of-the-art work on learning Gaussian mixture models has focused…

Machine Learning · Computer Science 2018-03-05 Dan Kushnir , Shirin Jalali , Iraj Saniee

Cold dense cores are unique among the structures found in the interstellar medium (ISM), as they harbor a rich chemical inventory, including complex organic molecules (COMs), which will be inherited by future evolutionary stages. These…

Astrophysics of Galaxies · Physics 2025-04-28 S. Maitrey , Liton Majumdar , Varun Manilal , Baibhav Srivastava , Prathap Rayalacheruvu , Karen Willacy , Eric Herbst

With the advent of large spectroscopic surveys the amount of high quality chemo-dynamical data in the Milky Way (MW) increased tremendously. Accurately and correctly capturing and explaining the detailed features in the high-quality…

The interstellar medium (ISM) is a fundamental component of the Milky Way. Studying its chemical composition and the level of its chemical diversity gives us insight into the evolution of the Milky Way and the role of gas in the Galactic…

We present cosmological hydrodynamical simulations of galaxy clusters aimed at studying the process of metal enrichment of the intra--cluster medium (ICM). These simulations have been performed by implementing a detailed model of chemical…

Astrophysics · Physics 2009-11-13 L. Tornatore , S. Borgani , K. Dolag , F. Matteucci

To assess how future progress in gravitational microlensing computation at high optical depth will rely on both hardware and software solutions, we compare a direct inverse ray-shooting code implemented on a graphics processing unit (GPU)…

Instrumentation and Methods for Astrophysics · Physics 2015-05-19 N. F. Bate , C. J. Fluke , B. R. Barsdell , H. Garsden , G. F. Lewis

We present a comparison between independent computer codes, modeling the physics and chemistry of interstellar photon dominated regions (PDRs). Our goal was to understand the mutual differences in the PDR codes and their effects on the…

For modeling the spectra of exoplanets one must know their atmospheric composition. This is necessary because the abundance of molecules, atoms, ions and condensates is needed to construct the total cross-section for the interaction between…

Instrumentation and Methods for Astrophysics · Physics 2024-10-30 Elise Lei , Paul Mollière

Constraining parameters such as the initial mass function high-mass slope and the frequency of type Ia supernovae is of critical importance in the ongoing quest to understand galactic physics and create realistic hydrodynamical simulations.…

Astrophysics of Galaxies · Physics 2020-01-08 Oliver Henry Edward Philcox , Jan Rybizki

Many proteins that undergo sequential enzymatic modification in the Golgi cisternae are displayed at the plasma membrane as cell identity markers. The modified proteins, called glycans, represent a molecular code. The fidelity of this…

Subcellular Processes · Quantitative Biology 2022-03-30 Alkesh Yadav , Quentin Vagne , Pierre Sens , Garud Iyengar , Madan Rao

Data-driven techniques have a large potential to transform and accelerate the chemical sciences. However, chemical sciences also pose the unique challenge of very diverse, small, fuzzy datasets that are difficult to leverage in conventional…

A combined N--body/SPH code is presented which benefits from the high speed of the special purpose hardware GRAPE (GRAvity PipE). Besides gravitational forces, GRAPE also returns the list of neighbours and can, therefore, be used to speed…

Astrophysics · Physics 2015-06-24 Matthias Steinmetz

We have studied gas-grain chemical models of interstellar clouds to search for nonlinear dynamical evolution. A prescription is given for producing oscillatory solutions when a bistable solution exists in the gas-phase chemistry and we…

Astrophysics of Galaxies · Physics 2023-05-01 Gwenaëlle Dufour , Steven B. Charnley , Johan E. Lindberg

In this note we present the starry_process code, which implements an interpretable Gaussian process (GP) for modeling variability in stellar light curves. As dark starspots rotate in and out of view, the total flux received from a distant…

Solar and Stellar Astrophysics · Physics 2021-02-10 Rodrigo Luger , Daniel Foreman-Mackey , Christina Hedges

Magnetron sputtering is an essential technique in combinatorial materials science, enabling the efficient synthesis of thin-film materials libraries with continuous compositional gradients. For exploring multidimensional search spaces,…

Materials Science · Physics 2024-11-22 Felix Thelen , Rico Zehl , Jan Lukas Bürgel , Diederik Depla , Alfred Ludwig

We developed a portable code for dissipative particle dynamics (DPD) simulations. This Fortran program named CAMUS has a couple of notable features. One is the omission of constructing the so-called neighboring particles list, providing a…

Chemical Physics · Physics 2018-07-03 Hideo Doi , Koji Okuwaki , Takamitsu Naito , Sona Saitou , Yuji Mochizuki

The purpose of this paper is to show how existing scientific software can be parallelized using a separate thin layer of Python code where all parallel communication is implemented. We provide specific examples on such layers of code, and…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-05-18 Jon K. Nilsen , Xing Cai , Bjorn Hoyland , Hans Petter Langtangen

We introduce GAUCHE, a library for GAUssian processes in CHEmistry. Gaussian processes have long been a cornerstone of probabilistic machine learning, affording particular advantages for uncertainty quantification and Bayesian optimisation.…

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