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Accurate and efficient prediction of the molecular properties of drugs is one of the fundamental problems in drug research and development. Recent advancements in representation learning have been shown to greatly improve the performance of…

Biomolecules · Quantitative Biology 2022-06-17 Hui Liu , Yibiao Huang , Xuejun Liu , Lei Deng

Long document question answering is a challenging task due to its demands for complex reasoning over long text. Previous works usually take long documents as non-structured flat texts or only consider the local structure in long documents.…

Computation and Language · Computer Science 2022-10-20 Yuxiang Nie , Heyan Huang , Wei Wei , Xian-Ling Mao

Network embedding has attracted an increasing attention over the past few years. As an effective approach to solve graph mining problems, network embedding aims to learn a low-dimensional feature vector representation for each node of a…

Social and Information Networks · Computer Science 2020-08-10 Xiao Shen , Fu-Lai Chung

Identifying related entities and events within and across documents is fundamental to natural language understanding. We present an approach to entity and event coreference resolution utilizing contrastive representation learning. Earlier…

Computation and Language · Computer Science 2022-05-24 Benjamin Hsu , Graham Horwood

Transformer-based pre-training techniques of text and layout have proven effective in a number of document understanding tasks. Despite this success, multimodal pre-training models suffer from very high computational and memory costs.…

Computation and Language · Computer Science 2021-09-03 Laura Nguyen , Thomas Scialom , Jacopo Staiano , Benjamin Piwowarski

We study self-supervised learning on graphs using contrastive methods. A general scheme of prior methods is to optimize two-view representations of input graphs. In many studies, a single graph-level representation is computed as one of the…

Machine Learning · Computer Science 2021-07-22 Xinyi Xu , Cheng Deng , Yaochen Xie , Shuiwang Ji

We present an empirical study of adapting an existing pretrained text-to-text model for long-sequence inputs. Through a comprehensive study along three axes of the pretraining pipeline -- model architecture, optimization objective, and…

Computation and Language · Computer Science 2022-11-17 Wenhan Xiong , Anchit Gupta , Shubham Toshniwal , Yashar Mehdad , Wen-tau Yih

Contrastive graph node clustering via learnable data augmentation is a hot research spot in the field of unsupervised graph learning. The existing methods learn the sampling distribution of a pre-defined augmentation to generate data-driven…

Machine Learning · Computer Science 2023-10-23 Xihong Yang , Cheng Tan , Yue Liu , Ke Liang , Siwei Wang , Sihang Zhou , Jun Xia , Stan Z. Li , Xinwang Liu , En Zhu

Current language models often fail to incorporate long contexts efficiently during generation. We show that a major contributor to this issue are attention priors that are likely learned during pre-training: relevant information located…

Computation and Language · Computer Science 2023-10-04 Alexander Peysakhovich , Adam Lerer

Recently, graph neural networks (GNNs) have been widely used for document classification. However, most existing methods are based on static word co-occurrence graphs without sentence-level information, which poses three challenges:(1) word…

Computation and Language · Computer Science 2022-03-22 Yinhua Piao , Sangseon Lee , Dohoon Lee , Sun Kim

As the basic element of graph-structured data, node has been recognized as the main object of study in graph representation learning. A single node intuitively has multiple node-centered subgraphs from the whole graph (e.g., one person in a…

Artificial Intelligence · Computer Science 2023-09-01 Dong Li , Wenjun Wang , Minglai Shao , Chen Zhao

Legal text retrieval serves as a key component in a wide range of legal text processing tasks such as legal question answering, legal case entailment, and statute law retrieval. The performance of legal text retrieval depends, to a large…

Information Retrieval · Computer Science 2023-04-12 Ha-Thanh Nguyen , Manh-Kien Phi , Xuan-Bach Ngo , Vu Tran , Le-Minh Nguyen , Minh-Phuong Tu

We study the problem of adversarially robust self-supervised learning on graphs. In the contrastive learning framework, we introduce a new method that increases the adversarial robustness of the learned representations through i)…

Machine Learning · Computer Science 2021-02-26 Nikola Jovanović , Zhao Meng , Lukas Faber , Roger Wattenhofer

In this paper, we study the problem of unsupervised graph representation learning by harnessing the control properties of dynamical networks defined on graphs. Our approach introduces a novel framework for contrastive learning, a widely…

Machine Learning · Computer Science 2024-04-19 Obaid Ullah Ahmad , Anwar Said , Mudassir Shabbir , Waseem Abbas , Xenofon Koutsoukos

Recent multimodal models such as Contrastive Language-Image Pre-training (CLIP) have shown remarkable ability to align visual and linguistic representations. However, domains where small visual differences carry large semantic significance,…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Hiroshi Sasaki

The recent literature in text classification is biased towards short text sequences (e.g., sentences or paragraphs). In real-world applications, multi-page multi-paragraph documents are common and they cannot be efficiently encoded by…

Computation and Language · Computer Science 2022-10-26 Xiang Dai , Ilias Chalkidis , Sune Darkner , Desmond Elliott

Hierarchical neural architectures are often used to capture long-distance dependencies and have been applied to many document-level tasks such as summarization, document segmentation, and sentiment analysis. However, effective usage of such…

Computation and Language · Computer Science 2019-01-29 Ming-Wei Chang , Kristina Toutanova , Kenton Lee , Jacob Devlin

Recently, contrastive learning (CL) has emerged as a successful method for unsupervised graph representation learning. Most graph CL methods first perform stochastic augmentation on the input graph to obtain two graph views and maximize the…

Machine Learning · Computer Science 2021-03-01 Yanqiao Zhu , Yichen Xu , Feng Yu , Qiang Liu , Shu Wu , Liang Wang

We argue that Transformers are essentially graph-to-graph models, with sequences just being a special case. Attention weights are functionally equivalent to graph edges. Our Graph-to-Graph Transformer architecture makes this ability…

Computation and Language · Computer Science 2023-10-30 James Henderson , Alireza Mohammadshahi , Andrei C. Coman , Lesly Miculicich

Using Large Language Models (LLMs) to process graph-structured data is an active research area, yet current state-of-the-art approaches typically rely on multi-step pipelines with Graph Neural Network (GNN) encoders that compress rich…

Machine Learning · Computer Science 2026-05-12 Dario Vajda