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Biological and physical systems often exhibit distinct structures at different spatial/temporal scales. Persistent homology is an algebraic tool that provides a mathematical framework for analyzing the multi-scale structures frequently…

Algebraic Topology · Mathematics 2016-02-01 Jonathan Jaquette , Miroslav Kramár

Persistence diagrams are important descriptors in Topological Data Analysis. Due to the nonlinearity of the space of persistence diagrams equipped with their {\em diagram distances}, most of the recent attempts at using persistence diagrams…

Machine Learning · Computer Science 2019-08-09 Mathieu Carriere , Ulrich Bauer

We address combinatorial problems that can be formulated as minimization of a partially separable function of discrete variables (energy minimization in graphical models, weighted constraint satisfaction, pseudo-Boolean optimization, 0-1…

Computer Vision and Pattern Recognition · Computer Science 2015-05-05 Alexander Shekhovtsov

Multidimensional persistence studies topological features of shapes by analyzing the lower level sets of vector-valued functions. The rank invariant completely determines the multidimensional analogue of persistent homology groups. We prove…

Algebraic Topology · Mathematics 2009-08-04 Andrea Cerri , Barbara Di Fabio , Massimo Ferri , Patrizio Frosini , Claudia Landi

We present a parallelizable algorithm for computing the persistent homology of a filtered chain complex. Our approach differs from the commonly used reduction algorithm by first computing persistence pairs within local chunks, then…

Algebraic Topology · Mathematics 2013-03-05 Ulrich Bauer , Michael Kerber , Jan Reininghaus

It has been shown that $1$-parameter persistence modules have a very simple classification, namely there is a discrete invariant called a barcode that completely characterizes $1$-parameter persistence modules up to isomorphism. In…

Algebraic Topology · Mathematics 2021-11-02 Samantha Moore

Multidimensional persistence modules do not admit a concise representation analogous to that provided by persistence diagrams for real-valued functions. However, there is no obstruction for multidimensional persistent Betti numbers to admit…

Dynamical Systems · Mathematics 2013-05-29 Andrea Cerri , Claudia Landi

We believe three ingredients are needed for further progress in persistence and its use: invariants not relying on decomposition theorems to go beyond 1-dimension, outcomes suitable for statistical analysis and a setup adopted for…

Computational Geometry · Computer Science 2018-07-04 Henri Riihimäki , Wojciech Chacholski

Smooth parametrization consists in a subdivision of the mathematical objects under consideration into simple pieces, and then parametric representation of each piece, while keeping control of high order derivatives. The main goal of the…

Computational Geometry · Computer Science 2014-07-14 Y. Yomdin

The Rips filtration over a finite metric space and its corresponding persistent homology are prominent methods in TDA to summarise the shape of data. Crucial to their use is the bottleneck stability result. A generalisation of the Rips…

Algebraic Topology · Mathematics 2019-05-29 Katharine Turner

Persistent Homology (PH) allows tracking homology features like loops, holes and their higher-dimensional analogs, along with a single-parameter family of nested spaces. Currently, computing descriptors for complex data characterized by…

Computational Geometry · Computer Science 2020-10-19 Sara Scaramuccia , Federico Iuricich , Leila De Floriani , Claudia Landi

The classical persistence algorithm computes the unique decomposition of a persistence module implicitly given by an input simplicial filtration. Based on matrix reduction, this algorithm is a cornerstone of the emergent area of topological…

Algebraic Topology · Mathematics 2021-12-07 Tamal K. Dey , Cheng Xin

A fundamental tool in topological data analysis is persistent homology, which allows extraction of information from complex datasets in a robust way. Persistent homology assigns a module over a principal ideal domain to a one-parameter…

Algebraic Topology · Mathematics 2019-06-19 Heather A. Harrington , Nina Otter , Hal Schenck , Ulrike Tillmann

We find robust obstructions to representing a Hamiltonian diffeomorphism as a full $k$-th power, $k \geq 2,$ and in particular, to including it into a one-parameter subgroup. The robustness is understood in the sense of Hofer's metric. Our…

Symplectic Geometry · Mathematics 2015-02-20 Leonid Polterovich , Egor Shelukhin

Echoing recent calls to counter reliability and robustness concerns in machine learning via multiverse analysis, we present PRESTO, a principled framework for mapping the multiverse of machine-learning models that rely on latent…

Machine Learning · Computer Science 2024-06-04 Jeremy Wayland , Corinna Coupette , Bastian Rieck

We derive necessary and sufficient conditions for all global symmetries of the most general two Higgs doublet model (2HDM) scalar potential entirely in terms of reparametrization independent, i.e. basis invariant, objects. This culminates…

High Energy Physics - Phenomenology · Physics 2021-03-02 Miguel P. Bento , Rafael Boto , João P. Silva , Andreas Trautner

The Discrete Morse Theory of Forman appeared to be useful for providing filtration-preserving reductions of complexes in the study of persistent homology. So far, the algorithms computing discrete Morse matchings have only been used for…

Computational Geometry · Computer Science 2015-03-13 Madjid Allili , Tomasz Kaczynski , Claudia Landi

Persistent homology is a popular data analysis technique that is used to capture the changing topology of a filtration associated with some simplicial complex $K$. These topological changes are summarized in persistence diagrams. We propose…

Computational Geometry · Computer Science 2018-10-11 Tamal K. Dey , Ryan Slechta

Multiparameter persistence modules come up naturally in topological data analysis and topological robotics. Given a metric graph $(X,\delta)$, the second configuration space of $(X,\delta)$ with proximity parameters (for example, the…

Algebraic Topology · Mathematics 2023-10-10 Wenwen Li

In this paper we prove geometric residue theorems for bundle maps over a compact manifold. The theory developed associates residues to the singularity submanifolds of the map for any invariant polynomial. The theory is then applied to a…

dg-ga · Mathematics 2008-02-03 Sunil Nair