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This paper presents a new regularization method to train a fully convolutional network for semantic tissue segmentation in histopathological images. This method relies on the benefit of unsupervised learning, in the form of image…

Computer Vision and Pattern Recognition · Computer Science 2020-11-26 C. T. Sari , C. Sokmensuer , C. Gunduz-Demir

Segmenting medical images accurately and reliably is important for disease diagnosis and treatment. It is a challenging task because of the wide variety of objects' sizes, shapes, and scanning modalities. Recently, many convolutional neural…

Image and Video Processing · Electrical Eng. & Systems 2023-02-22 Ange Lou , Shuyue Guan , Murray Loew

Although having achieved great success in medical image segmentation, deep learning-based approaches usually require large amounts of well-annotated data, which can be extremely expensive in the field of medical image analysis. Unlabeled…

Computer Vision and Pattern Recognition · Computer Science 2020-07-01 Yingda Xia , Dong Yang , Zhiding Yu , Fengze Liu , Jinzheng Cai , Lequan Yu , Zhuotun Zhu , Daguang Xu , Alan Yuille , Holger Roth

Deep neural networks are increasingly being used for the analysis of medical images. However, most works neglect the uncertainty in the model's prediction. We propose an uncertainty-aware deep kernel learning model which permits the…

Machine Learning · Computer Science 2021-06-11 Zhiliang Wu , Yinchong Yang , Jindong Gu , Volker Tresp

Segmenting visual stimuli into distinct groups of features and visual objects is central to visual function. Classical psychophysical methods have helped uncover many rules of human perceptual segmentation, and recent progress in machine…

Computer Vision and Pattern Recognition · Computer Science 2023-10-12 Jonathan Vacher , Claire Launay , Pascal Mamassian , Ruben Coen-Cagli

We introduce Bayesian QuickNAT for the automated quality control of whole-brain segmentation on MRI T1 scans. Next to the Bayesian fully convolutional neural network, we also present inherent measures of segmentation uncertainty that allow…

Computer Vision and Pattern Recognition · Computer Science 2018-11-27 Abhijit Guha Roy , Sailesh Conjeti , Nassir Navab , Christian Wachinger

Deep learning models (DLMs) frequently achieve accurate segmentation and classification of tumors from medical images. However, DLMs lacking feedback on their image segmentation mechanisms, such as Dice coefficients and confidence in their…

Image and Video Processing · Electrical Eng. & Systems 2024-12-31 Elhoucine Elfatimi , Pratik Shah

Automatic and accurate segmentation for retinal and choroidal layers of Optical Coherence Tomography (OCT) is crucial for detection of various ocular diseases. However, because of the variations in different equipments, OCT data obtained…

Computer Vision and Pattern Recognition · Computer Science 2019-09-02 Jiexiang Wang , Cheng Bian , Meng Li , Xin Yang , Kai Ma , Wenao Ma , Jin Yuan , Xinghao Ding , Yefeng Zheng

Fluorescence microscopy images contain several channels, each indicating a marker staining the sample. Since many different marker combinations are utilized in practice, it has been challenging to apply deep learning based segmentation…

Computer Vision and Pattern Recognition · Computer Science 2021-01-28 Alvaro Gomariz , Raphael Egli , Tiziano Portenier , César Nombela-Arrieta , Orcun Goksel

This paper explores the segmentation of very small medical objects with significant clinical value. While Convolutional Neural Networks (CNNs), particularly UNet-like models, and recent Transformers have shown substantial progress in image…

Image and Video Processing · Electrical Eng. & Systems 2024-06-27 Lingjie Kong , Qiaoling Wei , Chengming Xu , Han Chen , Yanwei Fu

Medical Image Foundation Models have proven to be powerful tools for mask prediction across various datasets. However, accurately assessing the uncertainty of their predictions remains a significant challenge. To address this, we propose a…

Image and Video Processing · Electrical Eng. & Systems 2025-01-20 Xin Wang , Xiaoyu Liu , Peng Huang , Pu Huang , Shu Hu , Hongtu Zhu

Acquiring pixel-level annotations is often limited in applications such as histology studies that require domain expertise. Various semi-supervised learning approaches have been developed to work with limited ground truth annotations, such…

Computer Vision and Pattern Recognition · Computer Science 2024-03-20 Qiangguo Jin , Hui Cui , Changming Sun , Yang Song , Jiangbin Zheng , Leilei Cao , Leyi Wei , Ran Su

Deep learning-based semi-supervised learning (SSL) algorithms have led to promising results in medical images segmentation and can alleviate doctors' expensive annotations by leveraging unlabeled data. However, most of the existing SSL…

Computer Vision and Pattern Recognition · Computer Science 2023-05-09 Xiangde Luo , Jieneng Chen , Tao Song , Yinan Chen , Guotai Wang , Shaoting Zhang

While recent computer vision algorithms achieve impressive performance on many benchmarks, they lack robustness - presented with an image from a different distribution, (e.g. weather or lighting conditions not considered during training),…

Computer Vision and Pattern Recognition · Computer Science 2021-09-28 Sebastian Cygert , Bartłomiej Wróblewski , Karol Woźniak , Radosław Słowiński , Andrzej Czyżewski

Despite recent improvements in the accuracy of brain tumor segmentation, the results still exhibit low levels of confidence and robustness. Uncertainty estimation is one effective way to change this situation, as it provides a measure of…

Image and Video Processing · Electrical Eng. & Systems 2022-07-29 Ke Zou , Xuedong Yuan , Xiaojing Shen , Meng Wang , Huazhu Fu

In this paper we consider the problem of unsupervised anomaly segmentation in medical images, which has attracted increasing attention in recent years due to the expensive pixel-level annotations from experts and the existence of a large…

Image and Video Processing · Electrical Eng. & Systems 2021-12-20 Raunak Dey , Wenbo Sun , Haibo Xu , Yi Hong

Accurate medical image segmentation is essential for diagnosis and treatment planning of diseases. Convolutional Neural Networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they are…

Image and Video Processing · Electrical Eng. & Systems 2020-11-05 Ran Gu , Guotai Wang , Tao Song , Rui Huang , Michael Aertsen , Jan Deprest , Sébastien Ourselin , Tom Vercauteren , Shaoting Zhang

Automation of brain tumor segmentation in 3D magnetic resonance images (MRIs) is key to assess the diagnostic and treatment of the disease. In recent years, convolutional neural networks (CNNs) have shown improved results in the task.…

Image and Video Processing · Electrical Eng. & Systems 2021-01-01 Laura Mora Ballestar , Veronica Vilaplana

Integrated silicon photonic devices, which manipulate light to transmit and process information on a silicon-on-insulator chip, are highly sensitive to structural variations. Minor deviations during nanofabrication-the precise process of…

Computer Vision and Pattern Recognition · Computer Science 2024-11-27 Rambod Azimi , Yijian Kong , Dusan Gostimirovic , James J. Clark , Odile Liboiron-Ladouceur

Obtaining object response maps is one important step to achieve weakly-supervised semantic segmentation using image-level labels. However, existing methods rely on the classification task, which could result in a response map only attending…

Computer Vision and Pattern Recognition · Computer Science 2020-08-05 Yu-Ting Chang , Qiaosong Wang , Wei-Chih Hung , Robinson Piramuthu , Yi-Hsuan Tsai , Ming-Hsuan Yang