Related papers: ShinyCOPASI: a web-based exploratory interface for…
Statistics 101, 201, and 202 are three open-source interactive web applications built with R \citep{R} and Shiny \citep{shiny} to support the teaching of introductory statistics and probability. The apps help students carry out common…
This paper presents a synchronization-based, multi-process computational model of anticipatory systems called the Phase Web. It describes a self-organizing paradigm that explicitly recognizes and exploits the existence of a boundary between…
Static analyzers are complex pieces of software with large dependencies. They can be difficult to install, which hinders adoption and creates barriers for students learning static analysis. This work introduces Try-Mopsa: a scaled-down…
Software is increasingly produced in the form of ecosystems, collections of interdependent components maintained by a distributed community. These ecosystems act as network organizations, not markets, and thus often lack actionable…
Advancing beyond single monolithic language models (LMs), recent research increasingly recognizes the importance of model collaboration, where multiple LMs collaborate, compose, and complement each other. Existing research on this topic has…
With advances in sensing, computing, and communication technologies, Connected and Automated Vehicles (CAVs) are becoming feasible. The advent of CAVs presents new opportunities to improve the energy efficiency of individual vehicles.…
Kinsey Reporter is a global mobile app to share, explore, and visualize anonymous data about sex. Reports are submitted via smartphone, then visualized on a website or downloaded for offline analysis. In this paper we present the major…
Research goals: to identify the perspective learning simulation tool for Bachelors of Electromechanics. Research objectives: to prove the feasibility of using the simulation system Xcos on Web as a tool of forming of future Bachelors of…
Everybody knows how much synoptic maps are useful today. An excellent example above all is Google Earth: its simplicity and friendly interface allows every user to have the Earth maps ready in just one simple layout; nevertheless a crucial…
Canopy fuels and surface fuel models, topographic features and other canopy attributes such as stand height and canopy cover, provide the necessary spatial datasets required by various fire behaviour modelling simulators. This is a…
Software cost estimation based on multivariate data from completed projects requires the building of efficient models. These models essentially describe relations in the data, either on the basis of correlations between variables or of…
While self-supervised pretraining has reduced vision systems' reliance on synthetic data, simulation remains an indispensable tool for closed-loop optimization and rigorous out-of-distribution (OOD) evaluation. However, modern simulation…
Background: Biomedical research projects deal with data management requirements from multiple sources like funding agencies' guidelines, publisher policies, discipline best practices, and their own users' needs. We describe functional and…
In recent years, the research community has raised serious questions about the reproducibility of scientific work. In particular, since many studies include some kind of computing work, reproducibility is also a technological challenge, not…
CMasher is a Python package that provides a curated collection of scientific colormaps, showcased in the online documentation (https://cmasher.readthedocs.io). The colormaps in CMasher are all designed to be perceptually uniform sequential…
We introduce GraSPy, a Python library devoted to statistical inference, machine learning, and visualization of random graphs and graph populations. This package provides flexible and easy-to-use algorithms for analyzing and understanding…
To some organizations, building campus network is sometimes considered to be very expensive; and this has made the project uneasy to perform. Moreover, if the organization without sufficient IT knowledge does not have capable IT engineers,…
This paper is a brief update on developments in the BioDynaMo project, a new platform for computer simulations for biological research. We will discuss the new capabilities of the simulator, important new concepts simulation methodology as…
SBcoyote is an open-source cross-platform biochemical reaction viewer and editor released under the liberal MIT license. It is written in Python and uses wxPython to implement the GUI and the drawing canvas. It supports the visualization…
In today's world of big data, computational analysis has become a key driver of biomedical research. Recent exponential growth in the volume of available omics data has reshaped the landscape of contemporary biology, creating demand for a…