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We have created a knowledge graph based on major data sources used in ecotoxicological risk assessment. We have applied this knowledge graph to an important task in risk assessment, namely chemical effect prediction. We have evaluated nine…

Artificial Intelligence · Computer Science 2022-03-31 Erik B. Myklebust , Ernesto Jiménez-Ruiz , Jiaoyan Chen , Raoul Wolf , Knut Erik Tollefsen

Predicting missing links between entities in a knowledge graph is a fundamental task to deal with the incompleteness of data on the Web. Knowledge graph embeddings map nodes into a vector space to predict new links, scoring them according…

Artificial Intelligence · Computer Science 2023-02-14 Cosimo Gregucci , Mojtaba Nayyeri , Daniel Hernández , Steffen Staab

Knowledge graph embedding approaches represent nodes and edges of graphs as mathematical vectors. Current approaches focus on embedding complete knowledge graphs, i.e. all nodes and edges. This leads to very high computational requirements…

Artificial Intelligence · Computer Science 2020-09-18 Jan Portisch , Michael Hladik , Heiko Paulheim

Neural node embeddings have recently emerged as a powerful representation for supervised learning tasks involving graph-structured data. We leverage this recent advance to develop a novel algorithm for unsupervised community discovery in…

Social and Information Networks · Computer Science 2017-06-30 Weicong Ding , Christy Lin , Prakash Ishwar

Knowledge Graphs are an emerging form of knowledge representation. While Google coined the term Knowledge Graph first and promoted it as a means to improve their search results, they are used in many applications today. In a knowledge…

Artificial Intelligence · Computer Science 2020-03-13 Nicolas Heist , Sven Hertling , Daniel Ringler , Heiko Paulheim

Novelty is an inherent part of innovations and discoveries. Such processes may be considered as an appearance of new ideas or as an emergence of atypical connections between the existing ones. The importance of such connections hints for…

Digital Libraries · Computer Science 2020-03-24 Serhii Brodiuk , Vasyl Palchykov , Yurij Holovatch

The task of link prediction for knowledge graphs is to predict missing relationships between entities. Knowledge graph embedding, which aims to represent entities and relations of a knowledge graph as low dimensional vectors in a continuous…

Artificial Intelligence · Computer Science 2022-04-26 Yanhui Peng , Jing Zhang

Ontology-based approaches for predicting gene-disease associations include the more classical semantic similarity methods and more recently knowledge graph embeddings. While semantic similarity is typically restricted to hierarchical…

Machine Learning · Computer Science 2021-06-01 Susana Nunes , Rita T. Sousa , Catia Pesquita

In a real-world setting, visual recognition systems can be brought to make predictions for images belonging to previously unknown class labels. In order to make semantically meaningful predictions for such inputs, we propose a two-step…

Machine Learning · Computer Science 2017-08-29 Vincent P. A. Lonij , Ambrish Rawat , Maria-Irina Nicolae

Knowledge Graphs are a widely used method to represent relations between entities in various AI applications, and Graph Embedding has rapidly become a standard technique to represent Knowledge Graphs in such a way as to facilitate…

Machine Learning · Computer Science 2023-11-02 Zhijin Guo , Zhaozhen Xu , Martha Lewis , Nello Cristianini

Graph, as an important data representation, is ubiquitous in many real world applications ranging from social network analysis to biology. How to correctly and effectively learn and extract information from graph is essential for a large…

Machine Learning · Computer Science 2020-10-27 Xiaodong Jiang , Ronghang Zhu , Pengsheng Ji , Sheng Li

Knowledge Graphs (KGs) have gained considerable attention recently from both academia and industry. In fact, incorporating graph technology and the copious of various graph datasets have led the research community to build sophisticated…

Artificial Intelligence · Computer Science 2020-06-03 Bilal Abu-Salih , Marwan Al-Tawil , Ibrahim Aljarah , Hossam Faris , Pornpit Wongthongtham

There has been a surge of recent interest in learning representations for graph-structured data. Graph representation learning methods have generally fallen into three main categories, based on the availability of labeled data. The first,…

Machine Learning · Computer Science 2022-04-13 Ines Chami , Sami Abu-El-Haija , Bryan Perozzi , Christopher Ré , Kevin Murphy

The recent proliferation of knowledge graphs (KGs) coupled with incomplete or partial information, in the form of missing relations (links) between entities, has fueled a lot of research on knowledge base completion (also known as relation…

Machine Learning · Computer Science 2019-06-05 Deepak Nathani , Jatin Chauhan , Charu Sharma , Manohar Kaul

Mining graph data has become a popular research topic in computer science and has been widely studied in both academia and industry given the increasing amount of network data in the recent years. However, the huge amount of network data…

Machine Learning · Computer Science 2020-01-03 Wenwu Zhu , Xin Wang , Peng Cui

Knowledge graph embedding aims to learn distributed representations for entities and relations, and is proven to be effective in many applications. Crossover interactions --- bi-directional effects between entities and relations --- help…

Artificial Intelligence · Computer Science 2019-03-13 Wen Zhang , Bibek Paudel , Wei Zhang , Abraham Bernstein , Huajun Chen

This paper addresses the problems of missing reasoning chains and insufficient entity-level semantic understanding in large language models when dealing with tasks that require structured knowledge. It proposes a fine-tuning algorithm…

Computation and Language · Computer Science 2025-08-21 Wuyang Zhang , Yexin Tian , Xiandong Meng , Mengjie Wang , Junliang Du

Embedding knowledge graphs (KGs) into continuous vector spaces is a focus of current research. Early works performed this task via simple models developed over KG triples. Recent attempts focused on either designing more complicated triple…

Artificial Intelligence · Computer Science 2018-06-08 Boyang Ding , Quan Wang , Bin Wang , Li Guo

Representation learning has recently been successfully used to create vector representations of entities in language learning, recommender systems and in similarity learning. Graph embeddings exploit the locality structure of a graph and…

Machine Learning · Computer Science 2020-02-24 Shalin Shah , Venkataramana Kini

The scientific literature is a rich source of information for data mining with conceptual knowledge graphs; the open science movement has enriched this literature with complementary source code that implements scientific models. To exploit…

Machine Learning · Computer Science 2019-08-27 Kun Cao , James Fairbanks