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Prediction of toxicity levels of chemical compounds is an important issue in Quantitative Structure-Activity Relationship (QSAR) modeling. Although toxicity prediction has achieved significant progress in recent times through deep learning,…

Machine Learning · Computer Science 2019-07-22 Abdul Karim , Jaspreet Singh , Avinash Mishra , Abdollah Dehzangi , M. A. Hakim Newton , Abdul Sattar

Recently supervised machine learning has been ascending in providing new predictive approaches for chemical, biological and materials sciences applications. In this Perspective we focus on the interplay of machine learning algorithm with…

There is a growing need for fast and accurate methods for testing developmental neurotoxicity across several chemical exposure sources. Current approaches, such as in vivo animal studies, and assays of animal and human primary cell…

Quantitative Methods · Quantitative Biology 2020-02-26 Finn Kuusisto , Vitor Santos Costa , Zhonggang Hou , James Thomson , David Page , Ron Stewart

Predicting the chemical properties of compounds is crucial in discovering novel materials and drugs with specific desired characteristics. Recent significant advances in machine learning technologies have enabled automatic predictive…

Quantitative Methods · Quantitative Biology 2021-12-10 Yang Liu , Hisashi Kashima

Machine learning has become an important component for many systems and applications including computer vision, spam filtering, malware and network intrusion detection, among others. Despite the capabilities of machine learning algorithms…

Machine Learning · Statistics 2018-02-14 Andrea Paudice , Luis Muñoz-González , Andras Gyorgy , Emil C. Lupu

Chemical toxicity prediction using machine learning is important in drug development to reduce repeated animal and human testing, thus saving cost and time. It is highly recommended that the predictions of computational toxicology models…

Quantitative Methods · Quantitative Biology 2020-09-28 Kar Wai Lim , Bhanushee Sharma , Payel Das , Vijil Chenthamarakshan , Jonathan S. Dordick

Over the past decade, Artificial Intelligence has significantly advanced, mostly driven by large-scale neural approaches. However, in the chemical process industry, where safety is critical, these methods are often unsuitable due to their…

Machine Learning · Computer Science 2026-03-24 Julien Amblard , Niklas Groll , Matthew Tait , Mark Law , Gürkan Sin , Alessandra Russo

We train a neural network to predict chemical toxicity based on gene expression data. The input to the network is a full expression profile collected either in vitro from cultured cells or in vivo from live animals. The output is a set of…

Genomics · Quantitative Biology 2019-02-04 Peter Eastman , Vijay S. Pande

This research investigates the use of artificial intelligence and machine learning techniques to predict the toxicity of nanoparticles, a pressing concern due to their pervasive use in various industries and the inherent challenges in…

Chemical Physics · Physics 2024-09-25 Iqra Yousaf

Toxicity prediction of chemical compounds is a grand challenge. Lately, it achieved significant progress in accuracy but using a huge set of features, implementing a complex blackbox technique such as a deep neural network, and exploiting…

Machine Learning · Computer Science 2019-01-29 Abdul Karim , Avinash Mishra , M A Hakim Newton , Abdul Sattar

As machine learning becomes widely used for automated decisions, attackers have strong incentives to manipulate the results and models generated by machine learning algorithms. In this paper, we perform the first systematic study of…

Cryptography and Security · Computer Science 2021-09-29 Matthew Jagielski , Alina Oprea , Battista Biggio , Chang Liu , Cristina Nita-Rotaru , Bo Li

The accurate assessment of fish stocks is crucial for sustainable fisheries management. However, existing statistical stock assessment models can have low forecast performance of relevant stock parameters like recruitment or spawning stock…

Machine Learning · Computer Science 2023-08-08 Stefan Lüdtke , Maria E. Pierce

The objective of this study is to develop a good risk model for classifying business delinquency by simultaneously exploring several machine learning based methods including regularization, hyper-parameter optimization, and model ensembling…

Machine Learning · Computer Science 2020-10-13 Yan Wang , Xuelei Sherry Ni

Classification is an important supervised machine learning method, which is necessary and challenging issue for ecological research. It offers a way to classify a dataset into subsets that share common patterns. Notably, there are many…

Machine Learning · Statistics 2018-12-24 Md. Siraj-Ud-Doula , Md. Ashad Alam

High-throughput toxicity testing offers a fast and cost-effective way to test large amounts of compounds. A key component for such systems is the automated evaluation via machine learning models. In this paper, we address critical…

Computer Vision and Pattern Recognition · Computer Science 2025-10-10 Thomas Lautenschlager , Nils Friederich , Angelo Jovin Yamachui Sitcheu , Katja Nau , Gaëlle Hayot , Thomas Dickmeis , Ralf Mikut

The preservation of soil health is a critical challenge in the 21st century due to its significant impact on agriculture, human health, and biodiversity. We provide the first deep investigation of the predictive potential of machine…

Machine Learning · Statistics 2024-02-20 Rosa Aghdam , Xudong Tang , Shan Shan , Richard Lankau , Claudia Solís-Lemus

Machine learning (ML) refers to computer algorithms that predict a meaningful output or categorize complex systems based on a large amount of data. ML is applied in various areas including natural science, engineering, space exploration,…

This research focuses on rational pesticide design, using graph machine learning to accelerate the development of safer, eco-friendly agrochemicals, inspired by in silico methods in drug discovery. With an emphasis on ecotoxicology, the…

Machine Learning · Computer Science 2025-09-24 Jakub Adamczyk

We present a novel and simple method to numerically calculate Fisher Information Matrices for stochastic chemical kinetics models. The linear noise approximation is used to derive model equations and a likelihood function which leads to an…

Applications · Statistics 2015-05-27 Michal Komorowski , Maria J. Costa , David A. Rand , Michael Stumpf

The success of machine learning is fueled by the increasing availability of computing power and large training datasets. The training data is used to learn new models or update existing ones, assuming that it is sufficiently representative…

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