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Computing a Single-Linkage Dendrogram (SLD) is a key step in the classic single-linkage hierarchical clustering algorithm. Given an input edge-weighted tree $T$, the SLD of $T$ is a binary dendrogram that summarizes the $n-1$ clusterings…

Data Structures and Algorithms · Computer Science 2024-05-14 Laxman Dhulipala , Xiaojun Dong , Kishen N Gowda , Yan Gu

We develop the first fast spectral algorithm to decompose a random third-order tensor over $\mathbb{R}^d$ of rank up to $O(d^{3/2}/\text{polylog}(d))$. Our algorithm only involves simple linear algebra operations and can recover all…

Machine Learning · Computer Science 2022-06-30 Jingqiu Ding , Tommaso d'Orsi , Chih-Hung Liu , Stefan Tiegel , David Steurer

Parallel tempering (PT), also known as replica exchange, is the go-to workhorse for simulations of multi-modal distributions. The key to the success of PT is to adopt efficient swap schemes. The popular deterministic even-odd (DEO) scheme…

Machine Learning · Computer Science 2022-11-22 Wei Deng , Qian Zhang , Qi Feng , Faming Liang , Guang Lin

The efficient parallel execution of complex computations requires balancing the workload across processors while minimizing the communication between them. This inherent trade-off is often captured by graph partitioning or DAG scheduling…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-05-04 Pál András Papp , Toni Böhnlein , A. N. Yzelman

This article introduces HODLR2D, a new hierarchical low-rank representation for a class of dense matrices arising out of $N$ body problems in two dimensions. Using this new hierarchical framework, we propose a new fast matrix-vector product…

Numerical Analysis · Mathematics 2022-04-13 V A Kandappan , Vaishnavi Gujjula , Sivaram Ambikasaran

Methods for distributed optimization have received significant attention in recent years owing to their wide applicability in various domains. A distributed optimization method typically consists of two key components: communication and…

Optimization and Control · Mathematics 2018-06-04 Albert S. Berahas , Raghu Bollapragada , Nitish Shirish Keskar , Ermin Wei

The Hadamard product of two tensors in the tensor-train (TT) format is a fundamental operation across various applications, such as TT-based function multiplication for nonlinear differential equations or convolutions. However, conventional…

Quantum Physics · Physics 2026-02-23 Zhaonan Meng , Yuehaw Khoo , Jiajia Li , E. Miles Stoudenmire

The presence of many degenerate $d/f$ orbitals makes polynuclear transition metal compounds such as iron-sulfur clusters in nitrogenase challenging for state-of-the-art quantum chemistry methods. To address this challenge, we present the…

Chemical Physics · Physics 2023-12-22 Chunyang Xiang , Weile Jia , Wei-Hai Fang , Zhendong Li

In this paper, we present a parallel computing method for the coupled-cluster singles and doubles (CCSD) in periodic systems. The CCSD in periodic systems solves simultaneous equations for single-excitation and double-excitation amplitudes.…

Strongly Correlated Electrons · Physics 2019-11-04 Takumi Yamashita , Taichi Kosugi , Yu-ichiro Matsushita , Tetsuya Sakurai

To prepare images for better segmentation, we need preprocessing applications, such as smoothing, to reduce noise. In this paper, we present an enhanced computation method for smoothing 2D object in binary case. Unlike existing approaches,…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-03-31 Ramzi Mahmoudi , Mohamed Akil

We present a comprehensive study on the extraction of CFT data using tensor network methods, specially, from the fixed-point tensor of the linearized tensor renormalization group (lTRG) for the 2D classical Ising model near the critical…

Statistical Mechanics · Physics 2024-02-06 Wenhan Guo , Tzu-Chieh Wei

We investigate whether there are inherent limits of parallelization in the (randomized) massively parallel computation (MPC) model by comparing it with the (sequential) RAM model. As our main result, we show the existence of hard functions…

Data Structures and Algorithms · Computer Science 2020-08-18 Kai-Min Chung , Kuan-Yi Ho , Xiaorui Sun

In the numerical analysis of strongly correlated quantum lattice models one of the leading algorithms developed to balance the size of the effective Hilbert space and the accuracy of the simulation is the density matrix renormalization…

Strongly Correlated Electrons · Physics 2015-06-17 Csaba Nemes , Gergely Barcza , Zoltán Nagy , Örs Legeza , Péter Szolgay

A density-matrix renormalization group (DMRG) method for highly anisotropic two-dimensional systems is presented. The method consists in applying the usual DMRG in two steps. In the first step, a pure one dimensional calculation along the…

Strongly Correlated Electrons · Physics 2009-11-07 S. Moukouri , L. G. Caron

We present a parallel hierarchical solver for general sparse linear systems on distributed-memory machines. For large-scale problems, this fully algebraic algorithm is faster and more memory-efficient than sparse direct solvers because it…

Numerical Analysis · Mathematics 2017-12-21 Chao Chen , Hadi Pouransari , Sivasankaran Rajamanickam , Erik G. Boman , Eric Darve

We develop a multi-dimensional, parallelized domain decomposition strategy (DDC) for mass-transfer particle tracking (MTPT) methods. These methods are a type of Lagrangian algorithm for simulating reactive transport and are able to be…

Linear-scaling electronic-structure techniques, also called O(N) techniques, rely heavily on the multiplication of sparse matrices, where the sparsity arises from spatial cut-offs. In order to treat very large systems, the calculations must…

Materials Science · Physics 2009-10-31 D. R. Bowler , T. Miyazaki , M. J. Gillan

We propose a real-space renormalization group algorithm for accurately coarse-graining two-dimensional tensor networks. The central innovation of our method lies in utilizing variational boundary tensors as a globally optimized environment…

Statistical Mechanics · Physics 2026-03-03 Feng-Feng Song , Naoki Kawashima

The performance of the density matrix renormalization group (DMRG) is strongly influenced by the choice of the local basis of the underlying physical lattice. We demonstrate that, for the two-dimensional Hubbard model, the hybrid…

Strongly Correlated Electrons · Physics 2017-03-22 G. Ehlers , S. R. White , R. M. Noack

Tensor decomposition has become an essential tool in many applications in various domains, including machine learning. Sparse Matricized Tensor Times Khatri-Rao Product (MTTKRP) is one of the most computationally expensive kernels in tensor…

Hardware Architecture · Computer Science 2021-09-21 Sasindu Wijeratne , Rajgopal Kannan , Viktor Prasanna
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