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Now a day's, search engines are been most widely used for extracting information's from various resources throughout the world. Where, majority of searches lies in the field of biomedical for retrieving related documents from various…

Information Retrieval · Computer Science 2009-12-14 Jayanthi Manicassamy , P. Dhavachelvan

Automated relation extraction (RE) from biomedical literature is critical for many downstream text mining applications in both research and real-world settings. However, most existing benchmarking datasets for bio-medical RE only focus on…

Computation and Language · Computer Science 2022-07-20 Ling Luo , Po-Ting Lai , Chih-Hsuan Wei , Cecilia N Arighi , Zhiyong Lu

This work presents a Biomedical Literature Question Answering (Q&A) system based on a Retrieval-Augmented Generation (RAG) architecture, designed to improve access to accurate, evidence-based medical information. Addressing the shortcomings…

Computation and Language · Computer Science 2025-09-09 Mansi Garg , Lee-Chi Wang , Bhavesh Ghanchi , Sanjana Dumpala , Shreyash Kakde , Yen Chih Chen

Biomedical text summarization is a critical tool that enables clinicians to effectively ascertain patient status. Traditionally, text summarization has been accomplished with transformer models, which are capable of compressing long…

Computation and Language · Computer Science 2024-04-16 Hyunkyung Han , Jaesik Choi

This paper is interested in investigating whether human gaze signals can be leveraged to improve state-of-the-art search engine performance and how to incorporate this new input signal marked by human attention into existing neural…

Information Retrieval · Computer Science 2022-07-06 Sibo Dong , Justin Goldstein , Grace Hui Yang

Most of existing extractive multi-document summarization (MDS) methods score each sentence individually and extract salient sentences one by one to compose a summary, which have two main drawbacks: (1) neglecting both the intra and…

Computation and Language · Computer Science 2021-10-26 Moye Chen , Wei Li , Jiachen Liu , Xinyan Xiao , Hua Wu , Haifeng Wang

Aligning sentences in a reference summary with their counterparts in source documents was shown as a useful auxiliary summarization task, notably for generating training data for salience detection. Despite its assessed utility, the…

Computation and Language · Computer Science 2021-09-27 Ori Ernst , Ori Shapira , Ramakanth Pasunuru , Michael Lepioshkin , Jacob Goldberger , Mohit Bansal , Ido Dagan

Tabular data provide answers to a significant portion of search queries. However, reciting an entire result table is impractical in conversational search systems. We propose to generate natural language summaries as answers to describe the…

Information Retrieval · Computer Science 2020-07-13 Shuo Zhang , Zhuyun Dai , Krisztian Balog , Jamie Callan

In recent years, summarizers that incorporate domain knowledge into the process of text summarization have outperformed generic methods, especially for summarization of biomedical texts. However, construction and maintenance of domain…

Computation and Language · Computer Science 2019-08-23 Milad Moradi , Matthias Samwald

Retrieval-augmented generation (RAG) systems expose numerous design choices spanning query rewriting, chunking, retrieval depth, reranking, and context compression. In practice, these choices are often configured through heuristics,…

Artificial Intelligence · Computer Science 2026-05-29 Zhen Chen , Yibing Liu , Weihao Xie , Yu Liang , Peilin Chen , Shiqi Wang

Today, full-texts of scientific articles are often stored in different locations than the used datasets. Dataset registries aim at a closer integration by making datasets citable but authors typically refer to datasets using inconsistent…

Digital Libraries · Computer Science 2016-11-08 Behnam Ghavimi , Philipp Mayr , Christoph Lange , Sahar Vahdati , Sören AUER

Automatic text summarization tools help users in biomedical domain to acquire their intended information from various textual resources more efficiently. Some of the biomedical text summarization systems put the basis of their sentence…

Computation and Language · Computer Science 2017-05-31 Milad Moradi , Nasser Ghadiri

Despite extensive recent advances in summary generation models, evaluation of auto-generated summaries still widely relies on single-score systems insufficient for transparent assessment and in-depth qualitative analysis. Towards bridging…

Computation and Language · Computer Science 2022-10-26 Ben Schaper , Christopher Lohse , Marcell Streile , Andrea Giovannini , Richard Osuala

By harnessing pre-trained language models, summarization models had rapid progress recently. However, the models are mainly assessed by automatic evaluation metrics such as ROUGE. Although ROUGE is known for having a positive correlation…

Computation and Language · Computer Science 2021-06-03 Wonjin Yoon , Yoon Sun Yeo , Minbyul Jeong , Bong-Jun Yi , Jaewoo Kang

Large Language Models (LLMs) have shown improved generation performance through retrieval-augmented generation (RAG) following the retriever-reader paradigm, which supplements model inputs with externally retrieved knowledge. However, prior…

Computation and Language · Computer Science 2025-11-14 Zhanghao Hu , Qinglin Zhu , Siya Qi , Yulan He , Hanqi Yan , Lin Gui

Commonly adopted metrics for extractive summarization focus on lexical overlap at the token level. In this paper, we present a facet-aware evaluation setup for better assessment of the information coverage in extracted summaries.…

Computation and Language · Computer Science 2020-05-01 Yuning Mao , Liyuan Liu , Qi Zhu , Xiang Ren , Jiawei Han

This paper presents a new selection-based question answering dataset, SelQA. The dataset consists of questions generated through crowdsourcing and sentence length answers that are drawn from the ten most prevalent topics in the English…

Computation and Language · Computer Science 2016-10-31 Tomasz Jurczyk , Michael Zhai , Jinho D. Choi

Generalized Referring Expression Segmentation (GRES) extends the scope of classic RES to refer to multiple objects in one expression or identify the empty targets absent in the image. GRES poses challenges in modeling the complex spatial…

Computer Vision and Pattern Recognition · Computer Science 2024-03-22 Zhuofan Xia , Dongchen Han , Yizeng Han , Xuran Pan , Shiji Song , Gao Huang

We propose a framework for evaluating structured generative search summaries that are placed atop organic web search results. A structured summary, generated by a large language model, typically consists of an overview, several sections…

Information Retrieval · Computer Science 2026-05-27 Tetsuya Sakai , Jina Lee , Hanpei Fang , Young-In Song

In this work, we aim at developing an extractive summarizer in the multi-document setting. We implement a rank based sentence selection using continuous vector representations along with key-phrases. Furthermore, we propose a model to…

Computation and Language · Computer Science 2020-06-26 Mir Tafseer Nayeem , Yllias Chali
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