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Protein language models are a powerful tool for learning protein representations through pre-training on vast protein sequence datasets. However, traditional protein language models lack explicit structural supervision, despite its…

Biomolecules · Quantitative Biology 2024-02-09 Zuobai Zhang , Jiarui Lu , Vijil Chenthamarakshan , Aurélie Lozano , Payel Das , Jian Tang

Natural language place descriptions in everyday communication provide a rich source of spatial knowledge about places. An important step to utilize such knowledge in information systems is geo-referencing all the places referred to in these…

Artificial Intelligence · Computer Science 2017-10-11 Hao Chen , Maria Vasardani , Stephan Winter

Prompt learning has become a prevalent strategy for adapting vision-language foundation models to downstream tasks. As large language models (LLMs) have emerged, recent studies have explored the use of category-related descriptions as input…

Computer Vision and Pattern Recognition · Computer Science 2023-12-12 Yubin Wang , Xinyang Jiang , De Cheng , Dongsheng Li , Cairong Zhao

Probabilistic topic models are widely used to discover latent topics in document collections, while latent feature vector representations of words have been used to obtain high performance in many NLP tasks. In this paper, we extend two…

Computation and Language · Computer Science 2018-10-16 Dat Quoc Nguyen , Richard Billingsley , Lan Du , Mark Johnson

This paper presents a high-quality multilingual dataset for the documentation domain to advance research on localization of structured text. Unlike widely-used datasets for translation of plain text, we collect XML-structured parallel text…

Computation and Language · Computer Science 2020-06-25 Kazuma Hashimoto , Raffaella Buschiazzo , James Bradbury , Teresa Marshall , Richard Socher , Caiming Xiong

We propose an alternate approach to quantifying how well language models learn natural language: we ask how well they match the statistical tendencies of natural language. To answer this question, we analyze whether text generated from…

Computation and Language · Computer Science 2021-08-31 Clara Meister , Ryan Cotterell

The recent advancement of large language models has spurred a growing trend of integrating pre-trained language model (PLM) embeddings into topic models, fundamentally reshaping how topics capture semantic structure. Classical models such…

Computation and Language · Computer Science 2026-03-12 Hanlin Xiao , Mauricio A. Álvarez , Rainer Breitling

We present a novel framework for training large language models with continuously adjustable internal representations that span the full spectrum from localist (interpretable, rule-based) to distributed (generalizable, efficient) encodings.…

Machine Learning · Computer Science 2025-10-21 Joachim Diederich

Traditional Relational Topic Models provide a way to discover the hidden topics from a document network. Many theoretical and practical tasks, such as dimensional reduction, document clustering, link prediction, benefit from this revealed…

Machine Learning · Statistics 2015-03-31 Junyu Xuan , Jie Lu , Guangquan Zhang , Richard Yi Da Xu , Xiangfeng Luo

Recently, a large number of neural mechanisms and models have been proposed for sequence learning, of which self-attention, as exemplified by the Transformer model, and graph neural networks (GNNs) have attracted much attention. In this…

Computation and Language · Computer Science 2018-11-22 Pengfei Liu , Shuaichen Chang , Xuanjing Huang , Jian Tang , Jackie Chi Kit Cheung

Maintenance is a dominant component of software cost, and localizing reported defects is a significant component of maintenance. We propose a scalable approach that leverages the natural language present in both defect reports and source…

Software Engineering · Computer Science 2012-11-14 Zachary P. Fry , Westley Weimer

Structure learning is a core problem in AI central to the fields of neuro-symbolic AI and statistical relational learning. It consists in automatically learning a logical theory from data. The basis for structure learning is mining…

Artificial Intelligence · Computer Science 2023-06-21 Jonathan Feldstein , Dominic Phillips , Efthymia Tsamoura

Many prediction problems can be phrased as inferences over local neighborhoods of graphs. The graph represents the interaction between entities, and the neighborhood of each entity contains information that allows the inferences or…

Machine Learning · Computer Science 2016-11-22 Rakshit Agrawal , Luca de Alfaro , Vassilis Polychronopoulos

Large Language Models (LLMs) and pre-trained Language Models (LMs) have achieved impressive success on many software engineering tasks (e.g., code completion and code generation). By leveraging huge existing code corpora (e.g., GitHub),…

Software Engineering · Computer Science 2025-01-16 Xin Yin , Chao Ni , Xiaodan Xu , Xinrui Li , Xiaohu Yang

Probabilistic models often have parameters that can be translated, scaled, permuted, or otherwise transformed without changing the model. These symmetries can lead to strong correlation and multimodality in the posterior distribution over…

Machine Learning · Statistics 2013-12-20 Robert Nishihara , Thomas Minka , Daniel Tarlow

Linear chain conditional random fields (CRFs) combined with contextual word embeddings have achieved state of the art performance on sequence labeling tasks. In many of these tasks, the identity of the neighboring words is often the most…

Computation and Language · Computer Science 2021-03-31 Harshil Shah , Tim Xiao , David Barber

Place recognition is a key module in robotic navigation. The existing line of studies mostly focuses on visual place recognition to recognize previously visited places solely based on their appearance. In this paper, we address structural…

Robotics · Computer Science 2021-09-29 Giseop Kim , Sunwook Choi , Ayoung Kim

A considerable number of texts encountered daily are somehow connected with each other. For example, Wikipedia articles refer to other articles via hyperlinks, scientific papers relate to others via citations or (co)authors, while tweets…

Computation and Language · Computer Science 2025-08-08 Albert Roethel , Maria Ganzha , Anna Wróblewska

Providing technologies to communities or domains where training data is scarce or protected e.g., for privacy reasons, is becoming increasingly important. To that end, we generalise methods for unsupervised transfer from multiple input…

Computation and Language · Computer Science 2021-10-11 Kemal Kurniawan , Lea Frermann , Philip Schulz , Trevor Cohn

Duplicated code has a negative impact on the quality of software systems and should be detected at least. In this paper, we discuss an approach that improves source code retrieval using the structural information about the programs. We…

Software Engineering · Computer Science 2013-08-19 Yoshihisa Udagawa
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