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Graph neural networks (GNNs) demonstrate great performance in compound property and activity prediction due to their capability to efficiently learn complex molecular graph structures. However, two main limitations persist including…

Biomolecules · Quantitative Biology 2023-10-10 Apakorn Kengkanna , Masahito Ohue

In recent years, there has been a resurgence in methods that use distributed (neural) representations to represent and reason about semantic knowledge for robotics applications. However, while robots often observe previously unknown…

Robotics · Computer Science 2021-05-11 Angel Daruna , Mehul Gupta , Mohan Sridharan , Sonia Chernova

Over the past years, embedding learning on networks has shown tremendous results in link prediction tasks for complex systems, with a wide range of real-life applications. Learning a representation for each node in a knowledge graph allows…

Machine Learning · Computer Science 2026-02-03 Orell Trautmann , Olaf Wolkenhauer , Clémence Réda

Recent studies have shown great promise in applying graph neural networks for multivariate time series forecasting, where the interactions of time series are described as a graph structure and the variables are represented as the graph…

Machine Learning · Computer Science 2022-06-29 Junchen Ye , Zihan Liu , Bowen Du , Leilei Sun , Weimiao Li , Yanjie Fu , Hui Xiong

Dynamic graphs serve as a generic abstraction and description of the evolutionary behaviors of various complex systems (e.g., social networks and communication networks). Temporal link prediction (TLP) is a classic yet challenging inference…

Social and Information Networks · Computer Science 2023-06-30 Meng Qin , Dit-Yan Yeung

Graph is a universe data structure that is widely used to organize data in real-world. Various real-word networks like the transportation network, social and academic network can be represented by graphs. Recent years have witnessed the…

Machine Learning · Computer Science 2021-11-23 Xueyi Liu , Jie Tang

Accurate lane topology is essential for autonomous driving, yet traditional methods struggle to model the complex, non-linear structures-such as loops and bidirectional lanes-prevalent in real-world road structure. We present SeqGrowGraph,…

Computer Vision and Pattern Recognition · Computer Science 2025-07-08 Mengwei Xie , Shuang Zeng , Xinyuan Chang , Xinran Liu , Zheng Pan , Mu Xu , Xing Wei

We consider the graph link prediction task, which is a classic graph analytical problem with many real-world applications. With the advances of deep learning, current link prediction methods commonly compute features from subgraphs centered…

Machine Learning · Computer Science 2020-10-21 Lei Cai , Jundong Li , Jie Wang , Shuiwang Ji

In this paper, we provide a theory of using graph neural networks (GNNs) for multi-node representation learning (where we are interested in learning a representation for a set of more than one node, such as link). We know that GNN is…

Machine Learning · Computer Science 2022-01-19 Muhan Zhang , Pan Li , Yinglong Xia , Kai Wang , Long Jin

Supply chain network data is a valuable asset for businesses wishing to understand their ethical profile, security of supply, and efficiency. Possession of a dataset alone however is not a sufficient enabler of actionable decisions due to…

Machine Learning · Computer Science 2021-07-23 Ajmal Aziz , Edward Elson Kosasih , Ryan-Rhys Griffiths , Alexandra Brintrup

Topological data analysis uses tools from topology -- the mathematical area that studies shapes -- to create representations of data. In particular, in persistent homology, one studies one-parameter families of spaces associated with data,…

Machine Learning · Computer Science 2020-12-01 Guido Montúfar , Nina Otter , Yuguang Wang

Inductive representation learning on temporal heterogeneous graphs is crucial for scalable deep learning on heterogeneous information networks (HINs) which are time-varying, such as citation networks. However, most existing approaches are…

Machine Learning · Computer Science 2024-05-15 Chenglin Li , Yuanzhen Xie , Chenyun Yu , Lei Cheng , Bo Hu , Zang Li , Di Niu

We present a new approach for predictive modeling and its uncertainty quantification for mechanical systems, where coarse-grained models such as constitutive relations are derived directly from observation data. We explore the use of a…

Numerical Analysis · Mathematics 2020-06-24 Daniel Z. Huang , Kailai Xu , Charbel Farhat , Eric Darve

Dynamic networks have intrinsic structural, computational, and multidisciplinary advantages. Link prediction estimates the next relationship in dynamic networks. However, in the current link prediction approaches, only bipartite or…

Social and Information Networks · Computer Science 2020-06-09 Mohamoud Ali , Yugyung Lee , Praveen Rao

In this paper, we study the problem of learning probabilistic logical rules for inductive and interpretable link prediction. Despite the importance of inductive link prediction, most previous works focused on transductive link prediction…

Machine Learning · Computer Science 2019-11-04 Ali Sadeghian , Mohammadreza Armandpour , Patrick Ding , Daisy Zhe Wang

Traffic prediction is a fundamental and vital task in Intelligence Transportation System (ITS), but it is very challenging to get high accuracy while containing low computational complexity due to the spatiotemporal characteristics of…

Artificial Intelligence · Computer Science 2018-11-05 Xiaoyu Wang , Cailian Chen , Yang Min , Jianping He , Bo Yang , Yang Zhang

Representation learning on graphs, also called graph embedding, has demonstrated its significant impact on a series of machine learning applications such as classification, prediction and recommendation. However, existing work has largely…

Machine Learning · Computer Science 2022-06-28 Yifan Hou , Hongzhi Chen , Changji Li , James Cheng , Ming-Chang Yang

We present the Topology Transformation Equivariant Representation learning, a general paradigm of self-supervised learning for node representations of graph data to enable the wide applicability of Graph Convolutional Neural Networks…

Machine Learning · Computer Science 2021-12-03 Xiang Gao , Wei Hu , Guo-Jun Qi

Predicting the emergence of links in large evolving networks is a difficult task with many practical applications. Recently, the Science4cast competition has illustrated this challenge presenting a network of 64.000 AI concepts and asking…

Social and Information Networks · Computer Science 2022-01-26 Francisco Andrades , Ricardo Ñanculef

Despite recent advances in representation learning in hypercomplex (HC) space, this subject is still vastly unexplored in the context of graphs. Motivated by the complex and quaternion algebras, which have been found in several contexts to…

Machine Learning · Computer Science 2022-02-22 Tuan Le , Marco Bertolini , Frank Noé , Djork-Arné Clevert