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We investigate two approaches to increase the efficiency of phenotypic prediction from genome-wide markers, which is a key step for genomic selection (GS) in plant and animal breeding. The first approach is feature selection based on Markov…

Methodology · Statistics 2013-09-09 Marco Scutari , Ian Mackay , David J. Balding

Feature selection, as a critical pre-processing step for machine learning, aims at determining representative predictors from a high-dimensional feature space dataset to improve the prediction accuracy. However, the increase in feature…

Machine Learning · Statistics 2020-11-16 Fatemeh Amini , Guiping Hu

Artificial neural networks learn how to solve new problems through a computationally intense and time consuming process. One way to reduce the amount of time required is to inject preexisting knowledge into the network. To make use of past…

Neural and Evolutionary Computing · Computer Science 2015-09-10 Cosmin Stamate , George D. Magoulas , Michael S. C. Thomas

The development of an intelligent agricultural decision-supporting system for crop selection and disease forecasting in Bangladesh is the main objective of this work. The economy of the nation depends heavily on agriculture. However,…

Machine Learning · Computer Science 2024-03-29 Forkan Uddin Ahmed , Annesha Das , Md Zubair

While artificial intelligence (AI) has become widespread, many commercial AI systems are not yet accessible to individual researchers nor the general public due to the deep knowledge of the systems required to use them. We believe that AI…

Rice is a staple food of global importance in terms of trade, nutrition, and economic growth. Among Asian nations such as China, India, Pakistan, Thailand, Vietnam and Indonesia are leading producers of both long and short grain varieties,…

Computer Vision and Pattern Recognition · Computer Science 2025-08-28 Hamza Khan

The task of weed detection is an essential element of precision agriculture since accurate species identification allows a farmer to selectively apply herbicides and fits into sustainable agriculture crop management. This paper proposes a…

Computer Vision and Pattern Recognition · Computer Science 2025-11-20 Pandiyaraju V , Abishek Karthik , Sreya Mynampati , Poovarasan L , D. Saraswathi

The problem of inferring unknown graph edges from numerical data at a graph's nodes appears in many forms across machine learning. We study a version of this problem that arises in the field of \emph{landscape genetics}, where genetic…

Machine Learning · Computer Science 2021-03-11 Prathamesh Dharangutte , Christopher Musco

Risk prediction models using genetic data have seen increasing traction in genomics. However, most of the polygenic risk models were developed using data from participants with similar (mostly European) ancestry. This can lead to biases in…

Machine Learning · Computer Science 2022-05-11 Prashnna K Gyawali , Yann Le Guen , Xiaoxia Liu , Hua Tang , James Zou , Zihuai He

The broad sense genetic heritability, which quantifies the total proportion of phenotypic variation in a population due to genetic factors, is crucial for understanding trait inheritance. While many existing methods focus on estimating…

Methodology · Statistics 2024-11-04 Olivia Bley , Elizabeth Lei , Andy Zhou , Xiaoxi Shen

Agriculture is at the heart of the solution to achieve sustainability in feeding the world population, but advancing our understanding on how agricultural output responds to climatic variability is still needed. Precision Agriculture (PA),…

Machine Learning · Computer Science 2022-11-14 Swati Sharma , Aditi Partap , Maria Angels de Luis Balaguer , Sara Malvar , Ranveer Chandra

This paper details the application of a genetic programming framework for classification of decision tree of Soil data to classify soil texture. The database contains measurements of soil profile data. We have applied GATree for generating…

Neural and Evolutionary Computing · Computer Science 2010-11-04 P. Bhargavi , S. Jyothi

In the grain industry, the identification of seed purity is a crucial task as it is an important factor in evaluating the quality of seeds. For rice seeds, this property allows for the reduction of unexpected influences of other varieties…

Computer Vision and Pattern Recognition · Computer Science 2024-06-13 Phan Thi-Thu-Hong , Vo Quoc-Trinh , Nguyen Huu-Du

The increasing adoption of Artificial Intelligence (AI) has led to larger, more complex models with numerous parameters that require substantial computing power -- resources often unavailable in many real-world application scenarios. Our…

Artificial Intelligence · Computer Science 2025-07-28 Osama Almurshed , Ashish Kaushal , Asmail Muftah , Nitin Auluck , Omer Rana

In contrast to the rapid digitalization of several industries, agriculture suffers from low adoption of climate-smart farming tools. Even though AI-driven digital agriculture can offer high-performing predictive functionalities, it lacks…

Prediction of crop yield is essential for food security policymaking, planning, and trade. The objective of the current study is to propose novel crop yield prediction models based on hybrid machine learning methods. In this study, the…

Neural and Evolutionary Computing · Computer Science 2020-05-11 Saeed Nosratabadi , Felde Imre , Karoly Szell , Sina Ardabili , Bertalan Beszedes , Amir Mosavi

High-confidence prediction of complex traits such as disease risk or drug response is an ultimate goal of personalized medicine. Although genome-wide association studies have discovered thousands of well-replicated polymorphisms associated…

The integration of advanced technologies, such as Artificial Intelligence (AI), into manufacturing processes is attracting significant attention, paving the way for the development of intelligent systems that enhance efficiency and…

Neural and Evolutionary Computing · Computer Science 2025-12-09 Mohammadhossein Ghahramani , Yan Qiao , NaiQi Wu , Mengchu Zhou

Modelling genetic phenomena affecting biological traits is important for the development of agriculture as it allows breeders to predict the potential of breeding for certain traits. One such phenomenon is heterosis or hybrid vigor:…

Populations and Evolution · Quantitative Biology 2015-03-24 Peter M. F. Emmrich , Hannah E. Roberts , Vera Pancaldi

The impact of predictive algorithms on people's lives and livelihoods has been noted in medicine, criminal justice, finance, hiring and admissions. Most of these algorithms are developed using data and human capital from highly developed…

Machine Learning · Computer Science 2021-03-30 Xingyu Li , Difan Song , Miaozhe Han , Yu Zhang , Rene F. Kizilcec
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